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TRANSCRIPT CARD

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  1. Molecular Tool 'cicl16e24-MO (Hamada's MO)' > 
  2. Region 'REG00000067' > 
  3. Molecular Tool 'Pax3/7-MO (Imai 2009)' > 
  4. Transcript 'Boschl.CG.Botznik201...' > 
  5. Transcript 'Cisavi.CG.ENS81.R56....'

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R56.1022382-1025778.00307.t

Possible name(s)

PARN; PNLDC1

Gene model

Cisavi.CG.ENS81.R56.1022382-1025778

Location

R56 [1,022,381 / 1,025,778]

Sequences

Amino acid sequence

Length: 321

>Cisavi.CG.ENS81.R56.1022382-1025778.00307.p
MGSMLPFRDILTTTALGDMNARLREPPFQPADIAVPGKYNVGTTKSQDSNLHEAAYDAYI
TGAAFLAMVNYLKSFQSNNSSNSGKSLASFSSLRSLVSPYINKVFLMRSFDIPYLNLTGP
DLTPSRDHVFHVEFPSVWKSSDLRQLFTPVGQIHISWINETQCWVGLHNKTQTKNVKNLI
KVGSYDTFRLRTYKEYQSDASQRLPAATNGLKSPPLRPTSATPSFINIVEAAKIADPSDA
SVTPTQRKRPQSEVESPPTSTVDDCDEPTVKKQRSIEDCSTASPSPPSGSPDTATEPLTS
SVKMAVEIKDAPTGFAVPDDW

Nucleotide sequence

Length: 1,044

>Cisavi.CG.ENS81.R56.1022382-1025778.00307.t
CAAGCTAATGGGAAGCATGCTTCCTTTTAGGGACATACTAACCACCACCGCACTGGGAGA
TATGAACGCACGGCTGAGAGAACCCCCTTTCCAACCTGCTGATATTGCGGTGCCTGGCAA
ATACAATGTTGGGACAACAAAAAGCCAGGATTCCAACTTACACGAGGCAGCCTACGATGC
CTACATCACAGGTGCGGCATTCCTGGCAATGGTCAACTACCTGAAGTCATTCCAAAGCAA
CAACTCCAGCAACTCTGGCAAATCACTTGCTTCGTTCTCATCTCTGCGTTCACTGGTTTC
ACCATATATCAACAAGGTATTCCTGATGCGCAGTTTCGACATCCCTTACCTCAACCTGAC
CGGTCCCGATTTAACGCCGAGTCGGGACCACGTGTTTCACGTCGAGTTCCCCTCAGTATG
GAAATCGAGCGACCTCCGTCAGCTCTTTACTCCTGTAGGGCAGATCCACATTTCATGGAT
CAACGAGACTCAATGCTGGGTGGGACTGCACAACAAAACCCAGACCAAAAATGTTAAGAA
TCTCATCAAAGTCGGGTCGTACGACACTTTCCGATTACGCACGTACAAGGAATACCAGTC
GGATGCGTCGCAACGTTTGCCCGCCGCCACCAACGGACTAAAATCGCCCCCGTTGCGCCC
GACCTCCGCTACCCCATCGTTCATAAACATTGTTGAAGCCGCCAAAATAGCGGATCCGTC
AGACGCGTCCGTTACGCCGACGCAACGGAAGCGTCCGCAATCAGAAGTCGAGTCGCCCCC
GACGTCGACCGTCGACGACTGCGACGAACCGACAGTGAAAAAGCAGCGCTCGATAGAAGA
CTGCTCCACTGCCTCTCCATCGCCACCCAGCGGCTCACCGGACACTGCCACCGAACCACT
CACCTCGAGCGTCAAAATGGCGGTCGAAATAAAAGACGCACCAACGGGGTTCGCGGTCCC
GGACGACTGGTGATAATACTGCAGTTTTGTACGAAAATAAACGAGGGCGATTTATAAAAA
AACACCTCACTCACAATGAAAAAA

InterProScan

Gene3D
RNaseH_sf (IPR036397) - T[1-118] 1.2E-24
SUPERFAMILY
RBD_domain_sf (IPR035979) - T[113-178] 5.51E-7
Pfam
PolyA-riboNase_RNA_binding (IPR014789) - T[119-198] 1.6E-24
Gene3D
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[119-209] 9.0E-27

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
PARN_HUMAN 45.918 % 174 1.04E-49