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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.L92.4.v1.A...' > 
  2. Region 'REG00001441' > 
  3. Transcript 'Cisavi.CG.ENS81.R55....'

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R55.427393-430574.01155.t

Possible name(s)

RPL11

Gene model

Cisavi.CG.ENS81.R55.427393-430574

Location

R55 [427,392 / 430,574]

Sequences

Amino acid sequence

Length: 178

>Cisavi.CG.ENS81.R55.427393-430574.01155.p
MAEDSSKKSNCMRDIHIQKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSF
GIRRNEKIAVHCTVRGPKAEEILERGLKVREYELRQGNFSAMGNFGFGIQEHIDLGIKYD
PSIGIYGMDFYVMLARPGYNVRYRRKKKNRVGFPHRLNKGDGMRWFQQKYDGILLPGK

Nucleotide sequence

Length: 727

>Cisavi.CG.ENS81.R55.427393-430574.01155.t
CAACCATGGCAGAGGACAGCTCCAAGAAGTCGAATTGTATGCGGGACATCCATATTCAGA
AGTTATGCCTGAATATCTGTGTTGGTGAATCTGGTGACAGGCTTACAAGAGCTGCAAAAG
TCTTGGAACAGCTTACTGGTCAAACCCCAGTGTTTTCCAAAGCCCGCTACACTGTACGAT
CATTTGGCATCCGAAGAAATGAAAAAATTGCTGTGCATTGCACCGTTCGTGGCCCAAAAG
CTGAAGAAATCCTTGAAAGAGGATTAAAAGTACGGGAATACGAACTTAGGCAAGGGAATT
TCTCGGCAATGGGAAATTTCGGATTCGGTATTCAGGAACATATTGATTTGGGAATCAAGT
ACGACCCTTCAATCGGCATCTATGGTATGGACTTCTATGTGATGTTGGCCCGACCAGGTT
ACAACGTCCGGTATCGCCGGAAAAAGAAGAATCGAGTTGGTTTCCCCCACCGACTTAACA
AGGGCGACGGAATGAGATGGTTCCAACAAAAATACGATGGAATTCTGTTGCCTGGAAAAT
AAACACAGTTCGCCATATAATTGTGCGAATTAACTGCCTTGTGTGTCCTTCATAGTTACA
AAGTAGTTAGTTACACCAAAGTCGTCAGTTTTATATAGTTTCGGTCATTTCATGGGTCCA
CAGTGGATTGTTTTCAGCATCCATACACAAAGTACAAAGCAGTCTTCGGGGGAAAACTGG
TCCTGTT

InterProScan

PIRSF
Ribosomal_L5 (IPR002132) - T[1-172] 1.9E-39
Gene3D
Ribosomal_L5_dom_sf (IPR022803) - T[1-178] 5.5E-85
PANTHER
Ribosomal_L5 (IPR002132) - T[7-178] 1.1E-95
SUPERFAMILY
Ribosomal_L5_dom_sf (IPR022803) - T[10-173] 4.71E-57
Pfam
Ribosomal_L5_N (IPR031310) - T[10-63] 1.9E-20
ProSitePatterns
Ribosomal_L5_CS (IPR020929) - T[40-56] .
Pfam
Ribosomal_L5_C (IPR031309) - T[67-164] 4.4E-20

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RL11_HUMAN 77.528 % 294 1.63E-103