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TRANSCRIPT CARD

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  1. Transcript 'Boleac.CG.SB_v3.S849...'
  2. Transcript 'Harore.CG.MTP2014.S1...'
  3. Transcript 'Harore.CG.MTP2014.S2...'
  4. Transcript 'KH2012:KH.S1179.1.v1...'
  5. Transcript 'Cisavi.CG.ENS81.R54....'

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R54.998342-1009813.12437.t

Possible name(s)

CPNE2; CPNE4; CPNE7

Location

R54 [999,205 / 1,009,762]

Sequences

Amino acid sequence

Length: 487

>Cisavi.CG.ENS81.R54.998342-1009813.12437.p
TKVELTIACRNLQDKDVTSKSDPMCVVHLKDPVTKTWNEIARTERIKNELNPDFSKKVEM
LYYFEEVQQIRFSIFDIDNTSATLDDDDFLGETECSLAKVSAEEISDNRIATLSFKAHKL
DNKDFMGKSDPFLEFWRQNSDGTWTLAHRTEVVKNNLNPTWKPFVVPIQSLCGGDWDRKI
KVMCNDWDSDGSHDLIGEFITDMKELETSQKEFPCINAKKKAKKSKYKNSGTIHVTGCKV
EKQFSFLDFVFGGLQLNFTVGIDFPGSNGDPNSRDSLQFMDTVRPNEYLQALSAVGAVVQ
DYDTDKMYPALGFGAKIPPHYAVSHEFPLNFTPDNPYCQGIEGIIDGYKRAMPVLKFWGP
TNISPIINHVARFAYQAQSNDTSPSNYYILLILTDGITDMDETRQAIVGASNLPMSIIIV
GVGSADFSAMEMLDGDDGVLRAPSGQPVARDIVQFVPYREYKKASAAALAKAVLAEVPGQ
VTQYYRS

Nucleotide sequence

Length: 1,461

>Cisavi.CG.ENS81.R54.998342-1009813.12437.t
ACTAAAGTGGAACTTACGATCGCGTGTAGGAACCTACAAGATAAAGATGTGACTTCCAAG
TCAGACCCGATGTGTGTTGTTCATTTAAAGGATCCTGTGACAAAAACCTGGAATGAGATT
GCACGTACGGAGAGGATCAAGAACGAATTGAACCCAGACTTTAGCAAGAAGGTGGAGATG
CTCTATTATTTTGAAGAAGTGCAACAGATTCGTTTCTCAATCTTCGATATTGATAACACA
AGTGCTACCCTTGATGATGATGACTTCCTGGGAGAGACTGAGTGCTCATTAGCCAAGGTG
AGTGCTGAAGAGATAAGCGACAACCGAATTGCAACGTTGTCATTTAAAGCTCACAAACTT
GATAACAAGGACTTCATGGGCAAATCCGACCCATTTCTCGAGTTTTGGAGGCAAAATAGT
GATGGTACTTGGACATTGGCTCACAGGACAGAAGTGGTGAAGAATAACCTTAACCCTACA
TGGAAGCCATTTGTGGTCCCAATTCAATCTCTGTGTGGTGGAGATTGGGACCGGAAAATT
AAAGTAATGTGTAATGACTGGGATAGTGACGGGAGTCATGATCTCATCGGGGAATTCATC
ACCGACATGAAGGAGCTTGAGACCAGCCAGAAAGAATTTCCCTGCATCAACGCAAAGAAA
AAGGCAAAGAAATCGAAATATAAAAACTCTGGGACAATTCATGTGACTGGTTGCAAGGTG
GAGAAGCAATTCAGCTTCCTTGATTTTGTGTTCGGCGGTCTTCAACTTAACTTCACGGTT
GGTATCGACTTCCCCGGCTCCAACGGGGACCCAAATTCACGGGATTCCCTTCAGTTCATG
GACACTGTGAGGCCCAATGAATATTTACAAGCGCTTTCCGCGGTTGGAGCAGTGGTGCAG
GATTATGACACAGACAAGATGTACCCTGCCCTGGGGTTCGGGGCAAAGATTCCACCCCAC
TATGCCGTATCGCATGAGTTCCCTCTCAACTTCACCCCAGACAACCCTTATTGCCAAGGT
ATAGAAGGCATAATAGACGGGTACAAGCGTGCAATGCCAGTCCTCAAGTTCTGGGGTCCA
ACCAACATCTCCCCCATCATCAACCATGTTGCCAGGTTTGCGTACCAAGCACAGAGCAAC
GACACCTCCCCATCGAACTACTACATACTGCTAATACTAACTGATGGGATCACGGATATG
GACGAAACAAGACAGGCCATAGTTGGAGCATCCAACCTGCCAATGTCCATCATCATTGTT
GGTGTGGGTTCTGCGGATTTCAGTGCAATGGAGATGCTGGATGGTGATGACGGTGTACTA
CGCGCACCAAGTGGTCAACCAGTGGCCCGAGATATCGTGCAGTTCGTGCCGTATCGGGAA
TATAAGAAGGCGTCCGCGGCCGCGCTCGCTAAAGCTGTTCTTGCTGAGGTTCCCGGTCAG
GTAACGCAGTATTACCGCAGC

InterProScan

ProSiteProfiles
C2_dom (IPR000008) - T[1-94] 10.915 - T[95-200] 8.592
SMART
C2_dom (IPR000008) - T[1-109] 1.7E-6 - T[112-215] 2.6E-9
Gene3D
C2_domain_sf (IPR035892) - T[5-111] 4.1E-18 - T[112-238] 2.2E-21
Pfam
C2_dom (IPR000008) - T[7-103] 2.4E-13 - T[115-211] 5.9E-11
CDD
C2B_Copine (IPR037768) - T[109-216] 1.24719E-53
SMART
VWF_A (IPR002035) - T[255-457] 1.4E-7
SUPERFAMILY
vWFA_dom_sf (IPR036465) - T[255-456] 8.01E-16
Pfam
Copine (IPR010734) - T[276-486] 2.5E-77

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CPNE1_HUMAN 55.945 % 599 0
CPNE3_HUMAN 56.867 % 586 0
CPNE2_HUMAN 53.01 % 553 0