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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S2...'
  2. Transcript 'KH2012:KH.S1179.1.v1...'
  3. Transcript 'Cisavi.CG.ENS81.R54....'
  4. Transcript 'KH2012:KH.C3.150.v2....'
  5. Transcript 'Cisavi.CG.ENS81.R54....'

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R54.998342-1009813.12435.t

Possible name(s)

CPNE2; CPNE4; CPNE7

Location

R54 [999,193 / 1,009,792]

Sequences

Amino acid sequence

Length: 512

>Cisavi.CG.ENS81.R54.998342-1009813.12435.p
SMASGPAVCVTKVELTIACRNLQDKDVTSKSDPMCVVHLKDPVTKTWNEIARTERIKNEL
NPDFSKKVEMLYYFEEVQQIRFSIFDIDNTSATLDDDDFLGETECSLAKIVSSKTYKSPL
MTRAKKALSKSLIIVSIRSKKLSKYLIILPLLTCQVSVRQVLILFKYHLITHSASRVTEV
VKNNLNPTWKPFVVPIQSLCGGDWDRKIKVMCNDWDSDGSHDLIGEFITDMKELETSQKE
FPCINAKKKAKKSKYKNSGTIHVTGCKVEKQFSFLDFVFGGLQLNFTVGIDFPGSNGDPN
SRDSLQFMDTVRPNEYLQALSAVGAVVQDYDTDKMYPALGFGAKIPPHYAVSHEFPLNFT
PDNPYCQGIEGIIDGYKRAMPVLKFWGPTNISPIINHVARFAYQAQSNDTSPSNYYILLI
LTDGGHHGYGRNKTGHSWSIQPANMLDGDDGVLRAPSGQPVARDIVQFVPYREYKKPNVN
PHTQASAAALAKAVLAEVPGQVTQYYRSRGMQ

Nucleotide sequence

Length: 1,536

>Cisavi.CG.ENS81.R54.998342-1009813.12435.t
AGCATGGCCAGTGGTCCAGCTGTCTGTGTTACTAAAGTGGAACTTACGATCGCGTGTAGG
AACCTACAAGATAAAGATGTGACTTCCAAGTCAGACCCGATGTGTGTTGTTCATTTAAAG
GATCCTGTGACAAAAACCTGGAATGAGATTGCACGTACGGAGAGGATCAAGAACGAATTG
AACCCAGACTTTAGCAAGAAGGTGGAGATGCTCTATTATTTTGAAGAAGTGCAACAGATT
CGTTTCTCAATCTTCGATATTGATAACACAAGTGCTACCCTTGATGATGATGACTTCCTG
GGAGAGACTGAGTGCTCATTAGCCAAGATCGTGTCAAGCAAAACTTACAAATCTCCTTTG
ATGACCCGCGCCAAGAAAGCACTGTCAAAAAGTTTGATTATTGTAAGTATTCGATCTAAA
AAACTAAGTAAATATCTTATTATACTACCGTTGCTCACTTGTCAGGTCTCTGTAAGACAG
GTCTTGATACTTTTCAAATATCATCTCATAACTCATAGTGCGTCAAGAGTGACAGAAGTG
GTGAAGAATAACCTTAACCCTACATGGAAGCCATTTGTGGTCCCAATTCAATCTCTGTGT
GGTGGAGATTGGGACCGGAAAATTAAAGTAATGTGTAATGACTGGGATAGTGACGGGAGT
CATGATCTCATCGGGGAATTCATCACCGACATGAAGGAGCTTGAGACCAGCCAGAAAGAA
TTTCCCTGCATCAACGCAAAGAAAAAGGCAAAGAAATCGAAATATAAAAACTCTGGGACA
ATTCATGTGACTGGTTGCAAGGTGGAGAAGCAATTCAGCTTCCTTGATTTTGTGTTCGGC
GGTCTTCAACTTAACTTCACGGTTGGTATCGACTTCCCCGGCTCCAACGGGGACCCAAAT
TCACGGGATTCCCTTCAGTTCATGGACACTGTGAGGCCCAATGAATATTTACAAGCGCTT
TCCGCGGTTGGAGCAGTGGTGCAGGATTATGACACAGACAAGATGTACCCTGCCCTGGGG
TTCGGGGCAAAGATTCCACCCCACTATGCCGTATCGCATGAGTTCCCTCTCAACTTCACC
CCAGACAACCCTTATTGCCAAGGTATAGAAGGCATAATAGACGGGTACAAGCGTGCAATG
CCAGTCCTCAAGTTCTGGGGTCCAACCAACATCTCCCCCATCATCAACCATGTTGCCAGG
TTTGCGTACCAAGCACAGAGCAACGACACCTCCCCATCGAACTACTACATACTGCTAATA
CTAACTGATGGGGGCCATCACGGATATGGACGAAACAAGACAGGCCATAGTTGGAGCATC
CAACCTGCCAATATGCTGGATGGTGATGACGGTGTACTACGCGCACCAAGTGGTCAACCA
GTGGCCCGAGATATCGTGCAGTTCGTGCCGTATCGGGAATATAAGAAGCCTAACGTTAAC
CCTCACACACAGGCGTCCGCGGCCGCGCTCGCTAAAGCTGTTCTTGCTGAGGTTCCCGGT
CAGGTAACGCAGTATTACCGCAGCAGGGGTATGCAA

InterProScan

ProSiteProfiles
C2_dom (IPR000008) - T[1-104] 10.545
SMART
C2_dom (IPR000008) - T[11-119] 1.5E-7 - T[131-243] 3.2E-4
Gene3D
C2_domain_sf (IPR035892) - T[15-144] 4.7E-19 - T[154-266] 4.6E-13
Pfam
C2_dom (IPR000008) - T[17-116] 7.1E-14 - T[173-239] 3.3E-6
CDD
C2B_Copine (IPR037768) - T[178-244] 7.35553E-29
SUPERFAMILY
vWFA_dom_sf (IPR036465) - T[283-428] 1.5E-6
Pfam
Copine (IPR010734) - T[304-511] 2.6E-51

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CPNE1_HUMAN 47.858 % 497 1.03E-172
CPNE3_HUMAN 46.981 % 463 3.0E-159
CPNE2_HUMAN 45.149 % 440 3.12E-150