- Transcript 'Cisavi.CG.ENS81.R54....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R54.995822-998283.12419.t
Possible name(s)
CALM1; TNNC1; TNNC2
Gene model
Location
R54 [995,821 / 998,283]
Amino acid sequence
Length: 164
>Cisavi.CG.ENS81.R54.995822-998283.12419.p
MSMTVDDARAKLDKDQISEFKQAFDIFDEDGGGDISTRELGRVMKMLGQNPSREELAKIV
EEVDVDGSGTIDFDEFLIMMVMQISEEGKTAGEDELKDIFLLFDKDGDSYIDWDELKEAL
SSTSANPPVETWEVDELFREADKNGDGVIDIEEWSMWMEGVQSH
Nucleotide sequence
Length: 613
>Cisavi.CG.ENS81.R54.995822-998283.12419.t
CAGTAGAGATTGTTTGTAAAGATTATCGGATTAGAGAAAACGCATCAACATGTCGATGAC
CGTAGACGATGCCCGGGCGAAGTTGGACAAGGACCAGATTTCAGAATTCAAGCAAGCGTT
CGATATATTCGACGAGGATGGCGGTGGAGACATCAGTACAAGGGAGCTGGGCCGAGTTAT
GAAGATGCTGGGACAGAATCCTAGCCGAGAGGAGCTAGCAAAGATCGTTGAAGAAGTCGA
TGTGGATGGAAGTGGAACCATCGATTTTGATGAGTTTCTTATCATGATGGTCATGCAAAT
TAGCGAGGAAGGAAAAACGGCGGGGGAGGATGAACTCAAAGACATCTTCTTGCTATTTGA
CAAAGACGGAGATAGCTACATTGACTGGGACGAACTGAAGGAAGCACTGAGTTCCACGAG
CGCAAATCCGCCGGTGGAAACGTGGGAAGTCGACGAGTTATTCAGAGAAGCCGACAAGAA
CGGCGATGGAGTTATTGACATTGAAGAATGGAGTATGTGGATGGAAGGTGTACAATCTCA
CTAAACATCTCCCTCTGCTACCACCTTGTGCACCGATTACTACTAGCTCGAATAAATATT
TGTATACATTGTA
| SUPERFAMILY |
EF-hand-dom_pair (IPR011992) - T[11-161] 8.95E-42 |
| ProSiteProfiles |
EF_hand_dom (IPR002048) - T[15-50] 13.537 - T[51-86] 13.76 - T[91-126] 14.96 - T[133-164] 13.704 |
| SMART |
EF_hand_dom (IPR002048) - T[19-47] 5.0E-4 - T[55-83] 9.9E-5 - T[95-123] 2.5E-4 - T[133-161] 4.6E-6 |
| CDD |
EF_hand_dom (IPR002048) - T[19-80] 2.45813E-17 - T[95-158] 4.55075E-15 |
| Pfam |
EF_hand_dom (IPR002048) - T[19-80] 8.4E-12 - T[94-153] 4.2E-12 |
| ProSitePatterns |
EF_Hand_1_Ca_BS (IPR018247) - T[28-40] . - T[64-76] . - T[142-154] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CALM1_HUMAN | 47.297 % | 135 | 3.18E-41 |
| TNNC1_HUMAN | 50.633 % | 144 | 7.97E-45 |
| TNNC2_HUMAN | 53.205 % | 162 | 5.01E-52 |