- Transcript 'Cisavi.CG.ENS81.R54....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R54.1622068-1633688.14750.t
Possible name(s)
SLC6A1; SLC6A12; SLC6A13
Gene model
Location
R54 [1,623,159 / 1,633,064]
Amino acid sequence
Length: 519
>Cisavi.CG.ENS81.R54.1622068-1633688.14750.p
WGKPIEFIFSLLGYMVGLGNLWRFSYLCFKNGGGAFLVPYLLSVAVFGLPMYIFEIAIGQ
FTQQGKLNAWDRIPIMKGYGYACIVMTMMSIVPYMLVMAWGVIYLYHSFTSNDLPWTVCD
NQWNTQSCISYKHSILEVKIFKNPLTMTTNCSLPRYYVLRLPNEQDSIYGGFNWPMLICL
VLSYLSIVAITIKGIKSSGKVVYISATLPYLMIIVLLIRGLTLDGALNGISKLLIPKFEE
LANTQVWIEAASQVLYTYAIGFASLTTFSSYNNFNNNFYRQALILVPVGAFTSLLMGLMT
FSYLGHMASVLGVNVDKILKSGPGLIFQVIPLGFSLLPLPQLWSVLFFGMFYFVAVDSVV
CISSTLKGANNCQCSWTILYRPTHFMLSYINLCCHKMLTRLIQQSGIYIFEFIFYYGASG
IILLLLALCESLSVGWLWDVNQFAIDLEKMTGDKLSLWFKLCYRYFIPAITSSIFLFYCA
KWTPLKVGDFVYPVWANLLGWILSLCSLLWIPGVFIYVL
Nucleotide sequence
Length: 1,557
>Cisavi.CG.ENS81.R54.1622068-1633688.14750.t
TGGGGAAAACCGATCGAATTTATCTTTTCGCTTTTGGGTTATATGGTTGGCTTGGGAAAT
CTCTGGAGGTTTTCCTATCTCTGCTTTAAGAACGGTGGAGGCGCCTTTCTAGTGCCGTAC
CTTCTCTCGGTGGCAGTATTCGGACTCCCCATGTACATATTTGAAATCGCTATCGGTCAA
TTCACACAGCAGGGCAAGTTAAATGCGTGGGATCGGATCCCAATAATGAAGGGTTATGGA
TATGCTTGTATCGTCATGACGATGATGTCTATTGTTCCATACATGTTGGTAATGGCTTGG
GGGGTTATCTATCTCTATCATTCCTTCACCTCTAATGACCTCCCGTGGACAGTATGTGAT
AACCAGTGGAATACCCAATCTTGTATATCTTATAAGCACTCAATTTTGGAGGTAAAAATT
TTTAAAAACCCGCTCACAATGACAACAAATTGCTCATTACCTAGATATTACGTTCTGCGG
CTTCCCAACGAGCAAGACTCTATCTACGGAGGTTTCAACTGGCCGATGTTGATTTGTTTG
GTTCTTTCATATTTATCAATTGTTGCTATTACGATCAAAGGCATTAAGTCAAGCGGCAAG
GTCGTTTATATCTCAGCGACTTTACCTTACCTCATGATCATTGTACTTCTTATTCGAGGG
CTGACTTTAGACGGTGCTCTGAATGGAATTAGTAAATTATTGATCCCGAAATTCGAAGAG
TTAGCTAACACCCAGGTTTGGATTGAAGCCGCCTCACAGGTTTTATACACTTACGCCATT
GGATTTGCAAGCTTGACTACATTTTCAAGTTACAACAACTTTAATAACAACTTTTATAGA
CAAGCTCTCATTCTTGTGCCTGTTGGGGCTTTTACCTCGCTTCTGATGGGTTTGATGACG
TTTTCATATCTTGGGCACATGGCGTCCGTTCTTGGTGTAAACGTCGATAAAATACTAAAG
TCGGGTCCTGGTTTGATATTTCAAGTGATTCCCCTCGGATTTTCGTTACTTCCCCTTCCC
CAGCTGTGGTCCGTTCTATTCTTCGGGATGTTCTATTTCGTTGCTGTGGATTCTGTGGTA
TGTATATCATCGACGTTAAAAGGTGCAAATAATTGCCAGTGTTCTTGGACCATTTTATAT
AGGCCTACACATTTTATGTTATCTTATATAAATCTGTGTTGCCACAAAATGCTTACACGT
TTAATCCAACAGAGTGGAATTTACATATTTGAGTTTATTTTCTACTACGGAGCGTCTGGT
ATCATTCTACTTCTGCTCGCATTGTGTGAGTCCCTATCGGTAGGCTGGCTGTGGGATGTC
AATCAATTTGCCATCGACCTCGAGAAAATGACGGGCGACAAGTTATCCTTGTGGTTTAAG
CTATGCTATCGCTACTTTATCCCGGCCATAACCTCGTCGATATTTCTTTTCTATTGCGCA
AAATGGACTCCACTAAAGGTTGGTGACTTTGTTTACCCGGTTTGGGCTAACTTGCTTGGG
TGGATTCTGTCCTTGTGCTCGTTATTGTGGATACCAGGAGTATTTATTTACGTCCTG
| Pfam |
Na/ntran_symport (IPR000175) - T[1-517] 9.0E-138 |
| PANTHER |
Na/ntran_symport (IPR000175) - T[1-518] 2.8E-173 |
| SUPERFAMILY |
SNS_sf (IPR037272) - T[1-518] 4.71E-130 |
| ProSiteProfiles |
Na/ntran_symport (IPR000175) - T[1-519] 76.109 |
| PRINTS |
Na/ntran_symport (IPR000175) - T[6-27] 5.2E-50 - T[35-54] 5.2E-50 - T[78-104] 5.2E-50 - T[201-218] 5.2E-50 - T[283-303] 5.2E-50 - T[337-356] 5.2E-50 - T[420-440] 5.2E-50 - T[460-480] 5.2E-50 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| S6A13_HUMAN | 36.882 % | 349 | 4.92E-114 |
| SC6A3_HUMAN | 36.364 % | 346 | 1.76E-112 |
| SC6A1_HUMAN | 36.902 % | 370 | 6.25E-122 |
