- Transcript 'Cisavi.CG.ENS81.R54....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R54.1622068-1633688.14748.t
Possible name(s)
SLC6A1; SLC6A12; SLC6A13
Gene model
Location
R54 [1,623,150 / 1,633,091]
Amino acid sequence
Length: 564
>Cisavi.CG.ENS81.R54.1622068-1633688.14748.p
RVTWGKPIEFIFSLLGYMVGLGNLWRFSYLCFKNGGGAFLVPYLLSVAVFGLPMYIFEIA
IGQFTQQGKLNAWDRIPIMKGYGYACIVMTMMSIVPYMLVMAWGVIYLYHSFTSNDLPWT
VCDNQWNTQSCISYKQWLPGNNSTILNDSSLVQNYSDTYYVLRLPNEQDSIYGGFNWPML
ICLVLSYLSIVAITIKGIKSSGKVSRYGDFIDSASLVWRLCARLFLSSNIAASHARYSLT
PAEYKVRAVSLAACGCIAEFVITAACAITTSCGIVKLPNFNILCILFVTNPNPQVWIEAA
SQVLYTYAIGFASLTTFSSYNNFNNNFYRQALILVPVGAFTSLLMGLMTFSYLGHMASVL
GVNVDKILKSGPGLIFQVIPLGFSLLPLPQLWSVLFFGMFYFVAVDSVFSDFDALVTSIL
DIFPRFKGTGRRRVLANFAVAFVLFVASCTQLTSSGIYIFEFIFYYGASGIILLLLALCE
SLSVGWLWDVNQFAIDLEKMTGDKLSLWFKLCYRYFIPAITSVGDFVYPVWANLLGWILS
LCSLLWIPGVFIYVLYKGRGSMKQ
Nucleotide sequence
Length: 1,692
>Cisavi.CG.ENS81.R54.1622068-1633688.14748.t
AGGGTTACGTGGGGAAAACCGATCGAATTTATCTTTTCGCTTTTGGGTTATATGGTTGGC
TTGGGAAATCTCTGGAGGTTTTCCTATCTCTGCTTTAAGAACGGTGGAGGCGCCTTTCTA
GTGCCGTACCTTCTCTCGGTGGCAGTATTCGGACTCCCCATGTACATATTTGAAATCGCT
ATCGGTCAATTCACACAGCAGGGCAAGTTAAATGCGTGGGATCGGATCCCAATAATGAAG
GGTTATGGATATGCTTGTATCGTCATGACGATGATGTCTATTGTTCCATACATGTTGGTA
ATGGCTTGGGGGGTTATCTATCTCTATCATTCCTTCACCTCTAATGACCTCCCGTGGACA
GTATGTGATAACCAGTGGAATACCCAATCTTGTATATCTTATAAGCAGTGGTTGCCCGGT
AATAACTCGACTATTTTGAACGACAGCTCTCTTGTCCAAAACTACTCTGACACATATTAC
GTTCTGCGGCTTCCCAACGAGCAAGACTCTATCTACGGAGGTTTCAACTGGCCGATGTTG
ATTTGTTTGGTTCTTTCATATTTATCAATTGTTGCTATTACGATCAAAGGCATTAAGTCA
AGCGGCAAGGTTAGTAGATATGGAGATTTTATAGATAGCGCAAGTTTAGTATGGCGACTA
TGCGCACGTCTGTTTCTTTCAAGCAACATCGCAGCTAGCCATGCACGATATAGCCTAACC
CCGGCGGAATATAAAGTTCGTGCGGTAAGCCTTGCGGCATGCGGTTGCATTGCGGAATTC
GTAATCACTGCGGCATGCGCTATCACTACATCTTGCGGTATAGTAAAATTACCAAATTTT
AACATTTTGTGTATATTGTTCGTTACTAACCCGAATCCACAGGTTTGGATTGAAGCCGCC
TCACAGGTTTTATACACTTACGCCATTGGATTTGCAAGCTTGACTACATTTTCAAGTTAC
AACAACTTTAATAACAACTTTTATAGACAAGCTCTCATTCTTGTGCCTGTTGGGGCTTTT
ACCTCGCTTCTGATGGGTTTGATGACGTTTTCATATCTTGGGCACATGGCGTCCGTTCTT
GGTGTAAACGTCGATAAAATACTAAAGTCGGGTCCTGGTTTGATATTTCAAGTGATTCCC
CTCGGATTTTCGTTACTTCCCCTTCCCCAGCTGTGGTCCGTTCTATTCTTCGGGATGTTC
TATTTCGTTGCTGTGGATTCTGTGTTTTCAGATTTCGATGCTCTGGTGACGTCAATCTTA
GATATATTTCCCCGATTCAAAGGGACTGGCCGACGCAGGGTTCTTGCTAACTTTGCAGTT
GCCTTCGTGCTCTTTGTTGCTAGTTGTACCCAGTTAACCAGTAGTGGAATTTACATATTT
GAGTTTATTTTCTACTACGGAGCGTCTGGTATCATTCTACTTCTGCTCGCATTGTGTGAG
TCCCTATCGGTAGGCTGGCTGTGGGATGTCAATCAATTTGCCATCGACCTCGAGAAAATG
ACGGGCGACAAGTTATCCTTGTGGTTTAAGCTATGCTATCGCTACTTTATCCCGGCCATA
ACCTCGGTTGGTGACTTTGTTTACCCGGTTTGGGCTAACTTGCTTGGGTGGATTCTGTCC
TTGTGCTCGTTATTGTGGATACCAGGAGTATTTATTTACGTCCTGTACAAAGGCCGGGGA
TCAATGAAGCAG
| Pfam |
Na/ntran_symport (IPR000175) - T[1-205] 7.1E-56 - T[292-556] 1.1E-58 |
| ProSiteProfiles |
Na/ntran_symport (IPR000175) - T[1-560] 66.382 |
| SUPERFAMILY |
SNS_sf (IPR037272) - T[1-218] 2.09E-53 - T[280-556] 1.44E-64 |
| PANTHER |
Na/ntran_symport (IPR000175) - T[2-205] 3.7E-150 - T[292-560] 3.7E-150 |
| PRINTS |
Na/ntran_symport (IPR000175) - T[9-30] 1.8E-36 - T[38-57] 1.8E-36 - T[81-107] 1.8E-36 - T[332-352] 1.8E-36 - T[386-405] 1.8E-36 - T[470-490] 1.8E-36 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| S6A13_HUMAN | 32.702 % | 312 | 3.64E-99 |
| SC6A3_HUMAN | 33.913 % | 308 | 3.55E-97 |
| SC6A1_HUMAN | 32.526 % | 325 | 6.23E-104 |
