- Transcript 'Cisavi.CG.ENS81.R54....' >
- Transcript 'Cisavi.CG.ENS81.R54....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R54.1622068-1633688.14745.t
Possible name(s)
SLC6A1; SLC6A12; SLC6A13
Gene model
Location
R54 [1,623,141 / 1,633,091]
Amino acid sequence
Length: 531
>Cisavi.CG.ENS81.R54.1622068-1633688.14745.p
FNYRVTWGKPIEFIFSLLGYMVGLGNLWRFSYLCFKNGGGAFLVPYLLSVAVFGLPMYIF
EIAIGQFTQQGKLNAWDRIPIMKGYGYACIVMTMMSIVPYMLVMAWGVIYLYHSFTSNDL
PWTVCDNQWNTQSCISYKHSLVQNYSDTSLAQAQFWRYYVLRLPNEQDSIYGGFNWPMLI
CLVLSYLSIVAITIKGIKSSGKVVYISATLPYLMIIVLLIRGLTLDGALNGISKLLIPKF
EELANTQVWIEAASQVLYTYAIGFASLTTFSSYNNFNNNFYRQALILVPVGAFTSLLMGL
MTFSYLGHMASVLGVNVDKILKSGPGLIFQVIPLGFSLLPLPQLWSVLFFGMFYFVAVDS
VFSDFDALVTSILDIFPRFKGTGRRRVLANFAVAFVLFVASCTQLTSSGIYIFEFIFYYG
ASGIILLLLALCESLSVGWLWDVNQFAIDLEKMTGDKLSLWFKLCYRYFIPAITSSIFLF
YCAKWTPLKVGDFVYPVWANLLGWILSLCSLLWIPGVFIYVLYKGRGSMKQ
Nucleotide sequence
Length: 1,593
>Cisavi.CG.ENS81.R54.1622068-1633688.14745.t
TTTAATTACAGGGTTACGTGGGGAAAACCGATCGAATTTATCTTTTCGCTTTTGGGTTAT
ATGGTTGGCTTGGGAAATCTCTGGAGGTTTTCCTATCTCTGCTTTAAGAACGGTGGAGGC
GCCTTTCTAGTGCCGTACCTTCTCTCGGTGGCAGTATTCGGACTCCCCATGTACATATTT
GAAATCGCTATCGGTCAATTCACACAGCAGGGCAAGTTAAATGCGTGGGATCGGATCCCA
ATAATGAAGGGTTATGGATATGCTTGTATCGTCATGACGATGATGTCTATTGTTCCATAC
ATGTTGGTAATGGCTTGGGGGGTTATCTATCTCTATCATTCCTTCACCTCTAATGACCTC
CCGTGGACAGTATGTGATAACCAGTGGAATACCCAATCTTGTATATCTTATAAGCACTCT
CTTGTCCAAAACTACTCTGACACGTCGCTCGCACAAGCTCAATTTTGGAGATATTACGTT
CTGCGGCTTCCCAACGAGCAAGACTCTATCTACGGAGGTTTCAACTGGCCGATGTTGATT
TGTTTGGTTCTTTCATATTTATCAATTGTTGCTATTACGATCAAAGGCATTAAGTCAAGC
GGCAAGGTCGTTTATATCTCAGCGACTTTACCTTACCTCATGATCATTGTACTTCTTATT
CGAGGGCTGACTTTAGACGGTGCTCTGAATGGAATTAGTAAATTATTGATCCCGAAATTC
GAAGAGTTAGCTAACACCCAGGTTTGGATTGAAGCCGCCTCACAGGTTTTATACACTTAC
GCCATTGGATTTGCAAGCTTGACTACATTTTCAAGTTACAACAACTTTAATAACAACTTT
TATAGACAAGCTCTCATTCTTGTGCCTGTTGGGGCTTTTACCTCGCTTCTGATGGGTTTG
ATGACGTTTTCATATCTTGGGCACATGGCGTCCGTTCTTGGTGTAAACGTCGATAAAATA
CTAAAGTCGGGTCCTGGTTTGATATTTCAAGTGATTCCCCTCGGATTTTCGTTACTTCCC
CTTCCCCAGCTGTGGTCCGTTCTATTCTTCGGGATGTTCTATTTCGTTGCTGTGGATTCT
GTGTTTTCAGATTTCGATGCTCTGGTGACGTCAATCTTAGATATATTTCCCCGATTCAAA
GGGACTGGCCGACGCAGGGTTCTTGCTAACTTTGCAGTTGCCTTCGTGCTCTTTGTTGCT
AGTTGTACCCAGTTAACCAGTAGTGGAATTTACATATTTGAGTTTATTTTCTACTACGGA
GCGTCTGGTATCATTCTACTTCTGCTCGCATTGTGTGAGTCCCTATCGGTAGGCTGGCTG
TGGGATGTCAATCAATTTGCCATCGACCTCGAGAAAATGACGGGCGACAAGTTATCCTTG
TGGTTTAAGCTATGCTATCGCTACTTTATCCCGGCCATAACCTCGTCGATATTTCTTTTC
TATTGCGCAAAATGGACTCCACTAAAGGTTGGTGACTTTGTTTACCCGGTTTGGGCTAAC
TTGCTTGGGTGGATTCTGTCCTTGTGCTCGTTATTGTGGATACCAGGAGTATTTATTTAC
GTCCTGTACAAAGGCCGGGGATCAATGAAGCAG
| ProSiteProfiles |
Na/ntran_symport (IPR000175) - T[3-527] 83.277 |
| SUPERFAMILY |
SNS_sf (IPR037272) - T[4-523] 3.79E-141 |
| Pfam |
Na/ntran_symport (IPR000175) - T[4-523] 1.4E-149 |
| PANTHER |
Na/ntran_symport (IPR000175) - T[5-527] 4.9E-190 |
| PRINTS |
Na/ntran_symport (IPR000175) - T[12-33] 6.1E-50 - T[41-60] 6.1E-50 - T[84-110] 6.1E-50 - T[203-220] 6.1E-50 - T[285-305] 6.1E-50 - T[339-358] 6.1E-50 - T[423-443] 6.1E-50 - T[463-483] 6.1E-50 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| S6A13_HUMAN | 38.951 % | 392 | 1.43E-130 |
| S6A11_HUMAN | 38.361 % | 393 | 2.1E-130 |
| SC6A1_HUMAN | 38.258 % | 413 | 9.16E-139 |
