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- Transcript 'Cisavi.CG.ENS81.R527...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R527.85723-87694.03191.t
Possible name(s)
TUBA1C; TUBA3C; TUBA3D
Gene model
Location
R527 [85,722 / 87,560]
Amino acid sequence
Length: 449
>Cisavi.CG.ENS81.R527.85723-87694.03191.p
RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGKH
VPRAVFVDLEPTVVDEIRTGTYRQLFHPEQMITGKEDAANNYARGHYTIGKEIVDIVLDR
IRKLADQCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAVYPAPVSTAVV
EPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDVERPSYTNLNRLIGQIVSSITASL
RFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVGEITNACFEPANQM
VKCDPRHGKYMACCMLYRGDVVPKDVNAAIASIKTKRTIQFVDWCPTGFKVGINYQPPTV
VPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAR
EDLAALEKDYEEVGADSGDGEAEDEEDEY
Nucleotide sequence
Length: 1,482
>Cisavi.CG.ENS81.R527.85723-87694.03191.t
CGTGAATGTATCTCGATCCATGTTGGCCAAGCCGGTGTTCAGATTGGCAATGCTTGTTGG
GAGCTTTACTGTCTTGAGCATGGAATCCAGCCTGATGGGCAAATGCCGAGTGACAAAACT
GTTGGCGGAGGCGACGATTCCTTTAATACGTTCTTCAGCGAGACTGGTGCAGGAAAGCAT
GTACCCAGAGCGGTATTTGTAGACCTGGAGCCCACCGTTGTTGATGAAATCCGCACTGGT
ACATACCGACAACTATTTCACCCGGAACAAATGATTACCGGAAAAGAGGACGCCGCCAAT
AACTATGCCCGAGGGCATTACACCATTGGAAAAGAGATTGTTGACATTGTCCTCGATCGT
ATCCGGAAGCTTGCAGATCAATGCACCGGTTTGCAAGGTTTCTTGATTTTCCACTCCTTC
GGAGGCGGAACTGGTTCCGGTTTTGCATCGCTCTTGATGGAGCGACTATCCGTAGATTAC
GGAAAGAAGTCTAAATTGGAATTTGCAGTTTACCCTGCCCCCGTGTCGACGGCCGTCGTA
GAGCCTTACAACTCGATCCTTACAACCCATACTACGCTAGAGCACTCAGACTGTGCATTT
ATGGTCGACAACGAGGCAATCTACGACATATGCCGTCGTAACCTGGACGTGGAACGTCCA
TCTTACACTAATCTTAATCGATTGATTGGTCAGATTGTTTCTTCCATCACCGCTTCGCTG
CGTTTCGATGGAGCTCTTAATGTCGACTTGACAGAATTCCAGACCAACTTAGTGCCGTAC
CCTCGCATTCATTTTCCGTTGGTCACCTATGCCCCAGTGATATCGGCCGAAAAAGCTTAC
CACGAGCAGCTGTCCGTTGGCGAAATTACCAACGCTTGCTTCGAACCTGCTAACCAGATG
GTGAAATGCGATCCTCGTCATGGGAAGTACATGGCTTGCTGTATGCTGTACCGTGGGGAC
GTTGTGCCGAAGGACGTTAATGCGGCTATCGCTTCAATTAAAACCAAGCGAACTATCCAG
TTCGTTGATTGGTGTCCGACTGGCTTCAAGGTTGGAATCAATTACCAGCCGCCAACCGTT
GTACCCGGTGGAGATTTGGCAAAAGTTCAACGAGCAGTTTGCATGTTGAGCAACACCACT
GCAATCGCCGAGGCGTGGGCACGTCTTGATCACAAGTTCGACCTGATGTATGCGAAGCGA
GCATTTGTTCACTGGTATGTTGGCGAGGGAATGGAAGAGGGCGAATTCTCCGAAGCTCGA
GAGGATCTTGCTGCTCTGGAAAAAGATTACGAGGAAGTTGGGGCGGACTCCGGAGATGGC
GAGGCCGAAGATGAGGAAGATGAATACTAAACCGCATTTTGATTTGTGTGTGTAGCCTTG
CCTCATGGCAATGTTTCCTTTACTTCAACAAAAATAAAGTGTGTTGCTTCATACTTTCCA
AAGCTTGGTGATTTTGTTTAAATATTGAATTCGTTAACGTTC
| SUPERFAMILY |
Tubulin/FtsZ_GTPase_sf (IPR036525) - T[1-242] 1.26E-99 |
| PANTHER |
Tubulin (IPR000217) - T[1-445] 0.0 |
| Gene3D |
Tubulin/FtsZ_GTPase_sf (IPR036525) - T[1-266] 5.6E-130 |
| Pfam |
Tubulin_FtsZ_GTPase (IPR003008) - T[2-211] 1.5E-68 |
| PRINTS |
Tubulin (IPR000217) - T[9-29] 5.5E-91 - T[52-71] 5.5E-91 - T[94-105] 5.5E-91 - T[107-131] 5.5E-91 - T[133-151] 5.5E-91 - T[152-173] 5.5E-91 - T[176-189] 5.5E-91 - T[190-210] 5.5E-91 - T[378-406] 5.5E-91 |
| PRINTS |
Alpha_tubulin (IPR002452) - T[17-32] 1.5E-119 - T[44-57] 1.5E-119 - T[87-100] 1.5E-119 - T[119-127] 1.5E-119 - T[147-159] 1.5E-119 - T[160-171] 1.5E-119 - T[212-224] 1.5E-119 - T[272-287] 1.5E-119 - T[319-340] 1.5E-119 - T[345-358] 1.5E-119 - T[358-377] 1.5E-119 - T[383-399] 1.5E-119 - T[420-436] 1.5E-119 |
| SMART |
Tubulin_FtsZ_GTPase (IPR003008) - T[48-244] 3.4E-83 |
| ProSitePatterns |
Tubulin_CS (IPR017975) - T[141-147] . |
| SUPERFAMILY |
Tub_FtsZ_C (IPR008280) - T[244-434] 1.07E-86 |
| SMART |
Tubulin/FtsZ_2-layer-sand-dom (IPR018316) - T[246-391] 1.3E-58 |
| Pfam |
Tubulin/FtsZ_2-layer-sand-dom (IPR018316) - T[261-389] 4.2E-51 |
| Gene3D |
Tubulin/FtsZ_C_sf (IPR037103) - T[267-381] 3.5E-67 |
| Gene3D |
Tubulin_C (IPR023123) - T[382-448] 5.9E-34 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TBA3C_HUMAN | 95.759 % | 904 | 0 |
| TBA3D_HUMAN | 95.759 % | 904 | 0 |
| TBA1C_HUMAN | 94.631 % | 875 | 0 |