- Transcript 'Cisavi.CG.ENS81.R5.2...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R5.2673069-2674974.05838.t
Possible name(s)
TUBA1C; TUBA3C; TUBA3D
Gene model
Location
R5 [2,673,068 / 2,674,922]
Amino acid sequence
Length: 415
>Cisavi.CG.ENS81.R5.2673069-2674974.05838.p
MPSDKTVGGNDDSFNTFFSETGAGKHVPRGVFVDLEPTVVDEIRNGTYRQLFHPEQMITG
KEDAANNYARGHYTIGKEIVDVVLDRIRKLSDQCTGLQGFLIFHSFGGGTGSGFASLLME
RLSVDYGKKSKLEFAVYPAPQVSTAVVEPYNSILTHTTLEHSDCAFMVDNEAIYDICRRN
LDVDRPSYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVI
SAEKAYHEQLSVGEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIACIK
TKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFD
LMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGLDSGDGDGEDEDDEY
Nucleotide sequence
Length: 1,394
>Cisavi.CG.ENS81.R5.2673069-2674974.05838.t
CAGTTATTTTTGAATATTTTACTTTGCAGAATTTATCAAAATGCGAGCAGTGTATCTCAA
TTCATGTTGGTCAAGCCGGTGTTCAGATCGGTAATGCTTGTTGGGAGCTGTACTGCTTGG
AGCATGGAATCCAACCTGATGGGCAAATGCCGAGTGACAAGACTGTTGGCGGAAACGACG
ACTCATTCAACACTTTCTTTAGCGAGACCGGTGCTGGAAAACATGTACCCAGGGGGGTAT
TTGTAGACCTCGAGCCAACGGTTGTAGATGAAATTCGCAATGGTACGTACCGTCAATTGT
TTCACCCCGAACAAATGATCACCGGAAAAGAGGACGCGGCAAACAACTATGCACGTGGTC
ATTACACCATTGGAAAGGAGATTGTCGACGTTGTTCTCGACCGTATCCGAAAGCTGTCGG
ATCAATGCACCGGTTTGCAGGGTTTCTTAATTTTTCATTCCTTCGGTGGTGGAACTGGTT
CTGGTTTTGCATCGCTCTTGATGGAACGACTATCCGTAGATTACGGGAAGAAGTCTAAAT
TGGAATTTGCAGTTTACCCTGCCCCGCAGGTGTCGACGGCAGTCGTTGAGCCTTACAACT
CTATCCTCACCCATACAACGCTGGAACATTCCGATTGTGCGTTTATGGTTGATAACGAGG
CAATCTATGATATATGCCGTCGTAACTTGGACGTGGACCGTCCATCTTACACTAATCTCA
ACCGGTTGATTGGTCAGATCGTGTCTTCGATCACAGCTTCGCTGCGTTTCGATGGAGCTC
TTAATGTCGACTTGACAGAATTCCAAACCAATTTGGTACCGTACCCTCGAATACATTTTC
CGTTGGTCACTTACGCTCCGGTCATATCGGCCGAAAAAGCTTACCACGAGCAGCTGTCCG
TTGGCGAAATTACCAACGCTTGCTTCGAACCTGCTAACCAGATGGTTAAATGTGATCCTC
GTCATGGAAAGTACATGGCTTGCTGTATGCTGTACCGTGGAGACGTTGTGCCCAAGGACG
TCAATGCTGCGATTGCTTGCATCAAAACAAAGCGAACCATTCAGTTTGTGGATTGGTGCC
CGACTGGATTCAAGGTTGGGATCAACTACCAACCACCAACCGTGGTACCAGGTGGTGACT
TGGCGAAAGTTCAACGAGCAGTCTGCATGCTGAGCAACACGACCGCCATCGCAGAGGCTT
GGGCTCGTCTCGACCACAAGTTCGATTTGATGTACGCCAAGCGTGCATTTGTTCACTGGT
ATGTCGGTGAAGGTATGGAGGAGGGGGAATTCTCCGAAGCCAGGGAGGATCTTGCTGCAT
TGGAGAAAGATTACGAGGAAGTTGGGTTGGACTCTGGAGATGGTGATGGGGAAGATGAAG
ATGATGAATACTAA
| PANTHER |
Tubulin (IPR000217) - T[1-411] 2.8E-282 |
| Gene3D |
Tubulin/FtsZ_GTPase_sf (IPR036525) - T[1-232] 3.3E-105 |
| SUPERFAMILY |
Tubulin/FtsZ_GTPase_sf (IPR036525) - T[6-208] 2.49E-78 |
| PRINTS |
Alpha_tubulin (IPR002452) - T[10-23] 7.9E-108 - T[53-66] 7.9E-108 - T[85-93] 7.9E-108 - T[113-125] 7.9E-108 - T[126-137] 7.9E-108 - T[178-190] 7.9E-108 - T[238-253] 7.9E-108 - T[285-306] 7.9E-108 - T[311-324] 7.9E-108 - T[324-343] 7.9E-108 - T[349-365] 7.9E-108 - T[386-402] 7.9E-108 |
| Pfam |
Tubulin_FtsZ_GTPase (IPR003008) - T[12-177] 5.0E-51 |
| SMART |
Tubulin_FtsZ_GTPase (IPR003008) - T[14-210] 3.5E-76 |
| PRINTS |
Tubulin (IPR000217) - T[18-37] 2.1E-78 - T[60-71] 2.1E-78 - T[73-97] 2.1E-78 - T[99-117] 2.1E-78 - T[118-139] 2.1E-78 - T[143-156] 2.1E-78 - T[156-176] 2.1E-78 - T[344-372] 2.1E-78 |
| ProSitePatterns |
Tubulin_CS (IPR017975) - T[107-113] . |
| SUPERFAMILY |
Tub_FtsZ_C (IPR008280) - T[210-399] 3.66E-86 |
| SMART |
Tubulin/FtsZ_2-layer-sand-dom (IPR018316) - T[212-357] 3.6E-58 |
| Pfam |
Tubulin/FtsZ_2-layer-sand-dom (IPR018316) - T[227-355] 1.2E-50 |
| Gene3D |
Tubulin/FtsZ_C_sf (IPR037103) - T[233-347] 1.5E-66 |
| Gene3D |
Tubulin_C (IPR023123) - T[348-401] 3.5E-34 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TBA3C_HUMAN | 95.545 % | 788 | 0 |
| TBA3D_HUMAN | 95.545 % | 788 | 0 |
| TBA1C_HUMAN | 92.308 % | 787 | 0 |