- Transcript 'Cisavi.CG.ENS81.R51....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R51.1638408-1658288.09933.t
Possible name(s)
NFX1; NFXL1; ZNFX1
Gene model
Location
R51 [1,638,407 / 1,658,288]
Amino acid sequence
Length: 1,111
>Cisavi.CG.ENS81.R51.1638408-1658288.09933.p
MVDFRGPPERRQDGSSQSRQERRQPRGFIPPHGVSNQAEQFQPNVAEFYSNSTAGYLPPD
LHYDGRGYETPNLFYPAEFANQPTYFGPNYMMAGTTTYPGTSMPHAFESPGFYADDMTAH
FTENQHYQTMLPDNSSAAGKSRRFSRQRNIKESGTSGEMYNPKLTAEDCRPHKNDRRSHQ
FKQPIRFSHQKENQNGKKTENIKDPGSKNTQAKGMNESKPEEKAPKSFSRTKGKKVEVMK
YDGGNQASVLHEQLSSGTYECMVCCDRVRPPQAVWSCMICYNVFHMGCIKKWARSPAAKV
GGTEDSGWRCPGCQNVSAKIPASYLCFCGKVKEPEYKKGEMPHSCGDLCGKARRNNPDCA
HPCNILCHPGPCPQFPAMVTKRCKCGKISSRVRCSQQKSLACNEVCGKNKNCSNHSCDVV
CHSGDCDPCHVKIKQACYCGLEDREVGCGSEEHRSQPNDTENGCYSCTNICNRVLSCGNH
NCSSVCHPGPCKPCSLLPSLVTRCPCSQTKLSDMQIDDGEEINRKSCLDPVPTCDKICGK
PLLCGGEDVHVCKQLCHTGPCSPCSDGESTIVCRCRKSEKDVPCTEFVEMDSYVCDRRCN
KKRKCGKHKCGQMCCTDTEHNCLQLCGRKLTCGNHRCDETCHRGACHTCYNVSFDELRCF
CNDKVIFPPIPCGMKAPECNKICSRMHPCTHPVRHSCHTEEHCPPCVELVKKTCNCGRTI
RGNIMCHIDNVSCGAPCFKVLACGHKCLRPCHKGMCIEDVEPCKQPCSIMRVECIHPCAN
PCHHGTACPTTPCKAMVTMKCECSRREEQVVCSAGGAIYQSVSSAAFASKQDGVINIDKI
LQTSGLPCDEECSVAARNKRFADALNITDAEYGSRPKQQYSEFLINMAKSDLAFIRTVEK
DLINLVESVGWLDVTKQSHTFPVMRREKRQAVHELADAFQCRSESLDVEPNRSVVATATK
SVSKQPTPLLSDVIMEQVTSEKVYSSSKQAQSKGRVLSSVKLVSFNSASSDSTSRPVLTR
KSTASGASGPSLKSSLNRPEISRSTLHRPAYAPDGRKEAVRIPPKVAPEHATGSRQEVKP
SATKYAPPHQRSAPATNTTKSKVIDYFDMSD
Nucleotide sequence
Length: 3,748
>Cisavi.CG.ENS81.R51.1638408-1658288.09933.t
TTTTCGTGATCATAGTTTAGTATCTTAATTGAAATCTCCTGAATTTGCTTAAACTTTTTG
TTAAATGTCATGAGCTTGAGCAAAACTGTGTATGGTGGATTTCCGAGGACCTCCTGAACG
TAGACAAGATGGTTCATCTCAATCAAGACAAGAAAGACGGCAACCACGAGGGTTTATCCC
GCCACACGGTGTCTCTAATCAAGCTGAACAATTCCAACCGAATGTAGCGGAGTTTTATTC
AAATTCTACAGCAGGCTATTTGCCGCCTGATCTACACTACGATGGAAGAGGATATGAGAC
ACCCAACTTATTCTATCCAGCTGAGTTCGCAAATCAACCAACTTATTTCGGTCCCAACTA
TATGATGGCTGGAACCACAACCTACCCTGGCACAAGCATGCCTCATGCGTTTGAATCTCC
TGGTTTCTACGCTGATGATATGACTGCACACTTTACCGAGAATCAACATTATCAGACCAT
GCTACCTGATAATTCTTCTGCTGCTGGGAAATCACGACGCTTCAGTCGGCAACGCAACAT
TAAAGAAAGTGGTACAAGTGGTGAGATGTACAACCCCAAACTCACCGCTGAGGATTGCAG
ACCTCATAAGAACGATAGAAGATCACATCAATTTAAACAACCGATTCGGTTCAGCCATCA
GAAGGAAAATCAAAATGGAAAGAAAACTGAAAACATTAAAGATCCTGGAAGTAAAAACAC
CCAAGCAAAAGGAATGAATGAAAGTAAACCAGAGGAAAAGGCACCAAAAAGTTTTTCCAG
AACAAAGGGCAAGAAAGTTGAAGTTATGAAATATGATGGTGGAAACCAGGCTTCTGTCTT
GCACGAGCAGTTATCATCGGGCACCTACGAATGCATGGTGTGCTGTGACCGTGTCCGACC
ACCGCAGGCAGTATGGAGCTGCATGATCTGCTATAATGTCTTTCACATGGGTTGCATCAA
AAAGTGGGCACGTTCTCCTGCCGCAAAAGTGGGAGGAACTGAAGATTCAGGGTGGAGATG
TCCAGGTTGCCAGAATGTGTCGGCGAAAATCCCTGCCTCCTACCTCTGCTTCTGCGGCAA
GGTAAAGGAACCCGAGTACAAGAAAGGTGAAATGCCGCACTCTTGTGGCGACCTCTGCGG
GAAAGCTCGAAGGAACAACCCGGATTGCGCCCACCCCTGCAACATCCTCTGTCACCCTGG
TCCATGCCCCCAATTCCCTGCCATGGTAACGAAGAGATGCAAATGTGGGAAGATATCGTC
TCGTGTCCGATGCAGTCAGCAGAAAAGCCTCGCCTGCAATGAAGTTTGTGGAAAGAACAA
GAACTGTTCCAACCATTCATGCGACGTCGTCTGCCATTCTGGTGACTGCGATCCATGTCA
TGTAAAAATCAAACAAGCATGTTACTGTGGATTGGAAGATAGAGAGGTGGGCTGTGGGTC
AGAGGAGCACAGGTCACAACCAAATGACACAGAGAACGGATGTTATTCCTGCACCAACAT
ATGCAACAGGGTGTTATCATGCGGAAACCACAACTGTTCCTCTGTATGCCACCCTGGCCC
ATGTAAACCCTGCTCTCTGCTGCCATCACTGGTCACCAGGTGTCCATGCTCGCAGACTAA
GTTGAGCGATATGCAAATAGATGATGGAGAGGAGATAAACAGGAAGAGTTGCTTGGATCC
AGTACCTACTTGTGATAAAATTTGCGGGAAACCCCTGCTGTGTGGGGGTGAGGACGTCCA
TGTTTGTAAGCAGCTCTGCCACACGGGTCCTTGTTCACCCTGTTCGGATGGAGAAAGCAC
CATTGTGTGCAGATGTCGAAAATCTGAGAAAGATGTGCCGTGCACGGAGTTTGTAGAGAT
GGATTCGTACGTCTGCGATCGTCGATGTAACAAGAAGCGGAAATGTGGGAAACATAAATG
TGGTCAGATGTGTTGTACGGACACGGAACACAACTGCTTGCAACTGTGCGGTCGTAAACT
CACCTGTGGCAACCACCGTTGCGACGAGACATGCCACCGCGGCGCCTGCCACACCTGCTA
CAACGTGAGCTTCGATGAGCTCCGGTGCTTCTGCAACGACAAAGTCATCTTCCCTCCCAT
CCCATGTGGGATGAAAGCTCCGGAATGCAACAAGATTTGCTCGAGGATGCACCCATGCAC
TCATCCTGTCCGCCATTCCTGCCACACGGAGGAGCACTGCCCACCATGCGTGGAGCTGGT
GAAGAAAACCTGCAACTGCGGTCGAACGATCCGCGGGAATATAATGTGCCACATCGACAA
TGTCTCCTGCGGTGCTCCATGCTTCAAAGTGCTCGCCTGTGGCCATAAGTGCCTTAGACC
CTGCCACAAGGGCATGTGCATCGAGGATGTGGAGCCGTGCAAGCAACCGTGCAGTATCAT
GAGAGTGGAATGCATCCACCCGTGCGCCAACCCGTGTCATCACGGCACCGCTTGCCCCAC
CACCCCATGCAAGGCCATGGTCACAATGAAATGCGAATGCTCGAGAAGAGAGGAGCAGGT
GGTGTGCTCAGCAGGTGGCGCTATATACCAAAGCGTGAGTTCGGCGGCGTTTGCTTCCAA
GCAAGATGGCGTCATCAATATCGACAAGATTCTACAAACGAGTGGTTTACCATGCGATGA
AGAATGCTCAGTGGCTGCGAGGAACAAGCGATTCGCGGATGCCCTCAACATCACCGACGC
GGAGTATGGATCCAGACCGAAACAGCAATATTCGGAATTCCTAATCAATATGGCCAAGTC
GGACTTGGCCTTCATACGGACGGTTGAAAAGGATTTAATAAACCTTGTGGAGTCGGTTGG
CTGGTTGGATGTTACGAAACAAAGCCACACTTTCCCAGTCATGAGACGGGAGAAACGTCA
GGCGGTGCACGAGCTCGCCGACGCCTTCCAGTGCCGGAGTGAAAGTCTTGACGTCGAACC
AAACCGAAGCGTCGTCGCCACCGCCACTAAGAGCGTTAGCAAGCAGCCCACACCGCTGCT
TAGTGACGTAATAATGGAACAAGTGACGTCGGAGAAAGTGTACAGCTCGTCGAAGCAAGC
GCAGTCGAAAGGACGAGTACTGAGCTCTGTCAAGCTCGTTTCGTTTAATTCCGCCTCCAG
CGACTCCACGTCACGACCTGTTCTTACTCGCAAATCAACCGCTAGTGGCGCTAGTGGTCC
CTCACTAAAGTCGTCCCTCAACCGACCGGAGATTTCGCGCTCGACGCTGCATCGTCCCGC
GTACGCCCCTGACGGCCGGAAAGAAGCCGTTCGAATCCCGCCAAAGGTCGCACCGGAGCA
CGCCACCGGTTCACGGCAGGAAGTGAAACCATCTGCTACGAAATACGCCCCTCCCCACCA
ACGATCCGCACCCGCCACCAACACCACCAAATCTAAAGTCATCGATTATTTCGATATGAG
CGATTAGGATTATCAGCAAAACTGACACCTTTCACGCGCGGATAATGCATTTTTTGCAAG
AAATTCGATACGTAAATTGGGTTTGGCTGGTAGATTGATCCACAGTTTGTGCTCCTGATG
TTTTGTGTTCACTTGAGTTGCTTAGAGATCATTTAGAGTGATTTTACGGAAATAAATTGA
CTGCAAAATCGAATTGGCTCAAGAGTTTGTATTTATGAAGCCGAATGTGGGTATTTGTCT
CCCTACATAGTTCGGAATTGGGTATTACAGTGATTGTAAATTGTACTTATAGCTACAACA
GCAACGATAAGATACCGTACAAGTACAA
| PANTHER |
NFX1_fam (IPR034078) - T[122-1010] 1.9E-296 |
| ProSiteProfiles |
Znf_PHD-finger (IPR019787) - T[258-316] 8.707 |
| ProSitePatterns |
Zinc_finger_PHD-type_CS (IPR019786) - T[261-313] . |
| ProSiteProfiles |
Znf_RING (IPR001841) - T[261-314] 9.789 |
| SMART |
Znf_NFX1 (IPR000967) - T[359-385] 2.0 - T[412-431] 0.0062 - T[477-496] 1.6E-4 - T[544-566] 0.66 - T[605-624] 24.0 - T[632-651] 0.044 - T[683-708] 66.0 - T[743-765] 0.081 - T[774-795] 16.0 |
| Pfam |
Znf_NFX1 (IPR000967) - T[360-373] 1.0 - T[412-429] 1.0E-4 - T[477-495] 8.6E-6 - T[544-565] 0.0032 - T[605-615] 120.0 - T[632-649] 4.3E-4 - T[743-764] 0.017 |
| SUPERFAMILY |
R3H_dom_sf (IPR036867) - T[871-981] 5.3E-17 |
| SMART |
R3H_dom (IPR001374) - T[881-959] 8.4E-7 |
| CDD |
R3H_NF-X1 (IPR034076) - T[886-958] 1.06899E-31 |
| Gene3D |
R3H_dom_sf (IPR036867) - T[887-967] 6.7E-8 |
| ProSiteProfiles |
R3H_dom (IPR001374) - T[892-960] 11.077 |
| Pfam |
R3H_dom (IPR001374) - T[894-957] 8.4E-15 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| NFXL1_HUMAN | 34.669 % | 238 | 2.17E-65 |
| NFX1_HUMAN | 48.635 % | 701 | 0 |