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  1. Clone 'ma144i04' > 
  2. Clone 'cign053a05' > 
  3. Transcript 'Cisavi.CG.ENS81.R49....'

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R49.937562-951397.13826.t

Possible name(s)

PCF11

Gene model

Cisavi.CG.ENS81.R49.937562-951397

Location

R49 [937,561 / 951,397]

Sequences

Amino acid sequence

Length: 723

>Cisavi.CG.ENS81.R49.937562-951397.13826.p
MDDSIEEYQSSLEDLTFNSKPHINMLTILADENKSNAENIVKLIEAQLYKAAAKLPILYL
LDSIVKNVGENYNPLFAKNIVNTFRQAFQTGNEKQKMSLYKLRTTWDEHFPLKKLHALDL
KIHTLDPNWPVKPLPAHLQDGATNIHVNPKFIKRNEPVAKPVNPVVPAKAQAKTNDVDKI
REQMIRQQKELLDLQQRKLMLELEQTKQELEAKQKEMHVQVGKHEKVARDPRLKSSHAPK
VPAGGLRVTVKNKPSGPPVREKQSAREPKVKTNGEHTQKVQVKPGRPSPSFPNKQEAAKI
KASLNVPKKRSPKIAPKKIKKSISPALDRPGSRLEMHSIQKPVPKTVEPKPKASIKETKK
LVQPSDEHPLEKLLPVPNEQRDAERRKKRTYRNKPRSPSPPPPKLARRSSSPAPIRQISP
DASVRRDPRQFGNENRRIRAMKDTQTRDSSRSSEGSLSPRFSPEPEANDPSKPSSQWKPP
PKRIRQQNDEPRNPPMRLNTESKLEIPQELTLSHQNEILRQADRQLQSGQLSHEQHQELL
KQLHQLFELQRIRKIQFEEDDDHRRKDNNLNRRGFVPVHPQRGGRRPIHPRNMAEDDPRF
RDRPHGPPMHNNRRLPPDHHFGRGRGLPGRGRPFRNHSPQSPRKNGGPINDPRIRREERP
KFAQNEEFPPHHFNRSPMRAEERREHHRSLSPHRSAGPADEAQKRQSDDHHKNLRKYAHS
DQN

Nucleotide sequence

Length: 2,296

>Cisavi.CG.ENS81.R49.937562-951397.13826.t
TTTTTTGTACAATCTGCGTTAACTATATTTGTTTAGGTAGTATGTGCATAAGAAGATTAT
AAAATTTAGTTGAAGTCGGCAGAGAGACCGTCTGTTTCGGTCTGAAGTTTTCGTTCAAAT
ATCAAAATGGATGACTCCATTGAAGAGTATCAATCTTCGCTGGAAGATCTAACCTTTAAT
TCAAAGCCCCACATCAATATGCTGACCATCTTGGCCGATGAAAACAAGTCCAATGCTGAG
AATATCGTCAAATTAATAGAAGCTCAGTTGTATAAGGCTGCAGCAAAGCTCCCAATTCTC
TACCTTCTGGATTCAATCGTAAAGAATGTTGGGGAAAACTACAACCCGCTTTTTGCGAAG
AACATTGTCAACACGTTTCGTCAAGCTTTTCAAACTGGAAATGAAAAGCAGAAAATGAGT
TTATACAAGCTAAGGACAACCTGGGATGAGCATTTTCCTCTTAAAAAACTTCATGCGCTT
GATCTAAAAATCCATACGTTGGACCCAAACTGGCCAGTAAAACCACTTCCAGCTCATCTG
CAAGATGGGGCAACTAATATTCATGTAAACCCAAAGTTTATTAAAAGAAATGAGCCTGTT
GCTAAACCAGTCAATCCAGTGGTTCCTGCTAAAGCTCAAGCAAAGACCAATGATGTAGAC
AAAATTCGCGAACAAATGATTCGGCAGCAAAAAGAGCTGTTGGACCTACAGCAGCGTAAA
TTAATGTTAGAATTGGAACAAACCAAGCAAGAACTGGAAGCAAAGCAGAAAGAAATGCAT
GTTCAAGTAGGAAAGCATGAAAAAGTGGCAAGAGATCCCAGACTAAAATCAAGCCATGCT
CCAAAGGTACCAGCAGGTGGATTGCGAGTCACTGTGAAAAATAAACCTTCTGGCCCACCT
GTGAGAGAGAAGCAATCTGCCAGAGAACCAAAAGTAAAAACTAATGGGGAACACACACAG
AAAGTTCAGGTGAAACCAGGGAGACCTTCTCCAAGCTTTCCTAACAAACAGGAGGCAGCC
AAAATCAAAGCATCGTTGAATGTACCTAAAAAACGGTCACCAAAAATTGCACCTAAAAAG
ATCAAAAAGAGCATTTCTCCAGCATTAGACAGACCTGGCAGTCGATTGGAGATGCATTCT
ATACAAAAACCAGTTCCAAAAACCGTGGAACCCAAGCCAAAAGCGTCAATTAAAGAAACA
AAGAAATTGGTACAACCAAGCGATGAACACCCATTGGAAAAGTTGTTGCCGGTTCCTAAC
GAGCAACGAGACGCCGAGCGTCGGAAGAAACGGACGTACCGCAACAAACCTCGTTCACCC
TCACCTCCACCTCCAAAACTGGCAAGAAGAAGCTCTTCACCTGCTCCAATCCGACAGATC
TCCCCTGATGCCAGTGTTCGCCGTGATCCTCGCCAGTTTGGGAATGAAAACCGCCGAATT
CGCGCAATGAAGGACACGCAAACTAGAGATTCATCCAGGTCAAGTGAGGGATCGCTGTCA
CCAAGATTTTCCCCCGAACCAGAGGCAAACGACCCGTCCAAACCATCATCTCAATGGAAG
CCGCCTCCTAAAAGGATTCGTCAACAAAATGATGAACCAAGGAATCCACCAATGCGTTTG
AACACAGAATCAAAACTGGAAATTCCCCAAGAACTTACTCTGAGCCATCAAAATGAGATA
TTGAGACAGGCGGACCGTCAGTTACAAAGTGGTCAGCTGAGCCACGAACAACACCAGGAG
TTATTGAAACAACTCCACCAACTGTTCGAGCTGCAACGCATCCGGAAGATTCAGTTTGAA
GAAGATGATGACCATAGGAGGAAGGACAACAACCTCAACCGACGAGGTTTTGTCCCTGTG
CATCCGCAACGGGGTGGAAGACGTCCGATCCATCCTCGGAACATGGCAGAAGATGATCCT
CGCTTCCGGGATCGTCCTCATGGTCCTCCCATGCATAACAACCGAAGACTACCTCCAGAT
CATCATTTCGGACGAGGTCGAGGACTCCCAGGAAGAGGAAGGCCGTTCCGGAACCACTCC
CCTCAAAGTCCGAGGAAAAATGGAGGACCCATTAACGATCCCCGCATCCGTAGAGAGGAA
CGCCCTAAGTTCGCTCAAAATGAGGAGTTTCCACCGCATCATTTTAACCGTTCCCCAATG
AGAGCAGAGGAGAGGAGGGAACATCATCGCTCTCTTTCTCCTCATCGCTCTGCTGGTCCT
GCGGATGAAGCTCAAAAGCGGCAATCGGACGACCACCACAAAAATCTTAGAAAATATGCA
CACAGTGATCAAAACC

InterProScan

Gene3D
ENTH_VHS (IPR008942) - T[1-126] 2.2E-35
ProSiteProfiles
CID_dom (IPR006569) - T[1-126] 31.438
SMART
CID_dom (IPR006569) - T[3-123] 2.9E-23
SUPERFAMILY
ENTH_VHS (IPR008942) - T[3-134] 1.57E-35
Pfam
RNA_pol_II-bd (IPR006903) - T[54-109] 7.7E-9

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
PCF11_HUMAN 53.846 % 223 2.98E-61