- Transcript 'KH2012:KH.C1.96.v3.R...' >
- Transcript 'Moocul.CG.ELv1_2.S69...' >
- Transcript 'KH2012:KH.C6.283.v1....' >
- Transcript 'Phmamm.CG.MTP2014.S3...' >
- Transcript 'Cisavi.CG.ENS81.R49....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R49.900562-907313.13776.t
Possible name(s)
MALRD1; MDGA1; MDGA2
Gene model
Location
R49 [900,561 / 906,247]
Amino acid sequence
Length: 439
>Cisavi.CG.ENS81.R49.900562-907313.13776.p
MNIEIGPPDCAFDGVEIYDYKANGSKYDLPLDYQDSLGMTKYCGKVPFPAVISATSKVDV
IFYSDEQDEENGFLMTWNAVPIPEDQFNCTFEASLCTGWSNLDSGYDELDWAINQGKTST
AGTGPDFDHTLNNENGSYVYIEASAPARPNYRAMLSTPTVQFTDKVAAMCVRYWYHMLGR
HVGTFAVAIESNGTSTIMTSYDGSQSDKWMMGELEVPKQDLPFRIIFTGIRGTGFVGDIA
LDDVTIVEEPCNYVAETTTEEITTTETIMTTTSQPETTTTGLIEPPMPGVIECLSNEYKC
ASGFSCISNEFICDGVPDCLDSDDEENCDGFDLTGLPPILTNASSTTQAVVTTTVVDIVP
SIVTTTIADLTTSSIAETMASSTTTQMMTTTTQPIEPSTTETVMLPTTQSTKLSTEQETI
TSSSVPKMTSSTTKPMTQS
Nucleotide sequence
Length: 1,529
>Cisavi.CG.ENS81.R49.900562-907313.13776.t
TTCTGAAAATCGTGTATTTCGTTCTTGTATTTAAATTCGTTACAGCCCAAGTCATCGTCA
ACGAAAGAAGTGATTGCGGTGGCGAATTCATAGCCTCCAACGGTTCGATTACCAGTCCGA
ATTACTCCGTTGGAAAGTATCCACCCAGTACAAGATGCATTTGGACGATTACTGTGCCAA
GTGACAAACGTATTGAGATTGCATTTCCCGTTATGAACATTGAAATCGGACCGCCTGACT
GCGCCTTCGACGGTGTAGAAATTTACGACTACAAAGCAAATGGAAGTAAATACGACTTGC
CACTTGACTATCAAGATTCTTTGGGCATGACGAAATACTGCGGGAAAGTCCCGTTTCCGG
CCGTGATCAGTGCGACAAGCAAAGTGGACGTGATATTTTATTCCGATGAACAGGATGAAG
AGAACGGGTTCTTGATGACCTGGAATGCGGTACCGATTCCCGAGGATCAGTTCAACTGCA
CCTTCGAAGCGAGTTTATGTACTGGGTGGTCAAATTTGGATTCAGGCTACGACGAACTTG
ACTGGGCGATTAATCAGGGAAAAACTTCGACTGCCGGAACAGGGCCAGACTTTGACCACA
CACTCAACAATGAAAATGGAAGCTATGTCTACATTGAAGCCTCCGCCCCAGCAAGGCCAA
ACTACAGAGCTATGCTCAGCACTCCAACTGTGCAGTTCACCGACAAAGTGGCTGCGATGT
GCGTCCGATACTGGTACCACATGTTAGGACGTCATGTCGGTACGTTTGCTGTTGCCATTG
AATCCAATGGTACCAGTACAATAATGACGTCATACGACGGGTCACAATCCGACAAATGGA
TGATGGGCGAACTTGAAGTACCCAAACAAGATCTTCCTTTTAGGATTATCTTTACTGGAA
TTCGTGGTACCGGTTTCGTTGGCGATATCGCATTGGATGACGTCACAATCGTTGAAGAAC
CTTGTAATTACGTCGCCGAAACCACGACAGAAGAAATCACGACAACTGAGACAATTATGA
CAACTACAAGTCAGCCAGAAACAACAACTACTGGATTAATAGAGCCGCCTATGCCAGGAG
TGATTGAATGCTTGAGCAACGAGTACAAATGTGCGTCTGGATTCAGCTGCATCTCGAACG
AGTTTATTTGCGACGGAGTGCCAGATTGTCTGGACAGCGACGACGAAGAAAATTGTGATG
GGTTTGATCTCACTGGGCTACCTCCTATTCTTACGAACGCCAGCAGTACAACGCAAGCTG
TTGTGACTACGACAGTTGTAGATATCGTTCCAAGCATTGTCACCACTACGATTGCCGATC
TTACAACCTCATCCATTGCCGAGACTATGGCGTCATCAACTACAACACAGATGATGACAA
CGACTACACAACCTATTGAGCCGTCGACCACAGAAACAGTGATGTTACCGACCACCCAAT
CTACAAAGTTATCGACTGAACAAGAAACCATAACTTCCTCATCTGTACCGAAAATGACGT
CATCAACCACTAAACCAATGACGCAATCA
| CDD |
CUB_dom (IPR000859) - T[1-79] 8.60403E-8 |
| ProSiteProfiles |
CUB_dom (IPR000859) - T[1-80] 10.312 |
| Gene3D |
Sperma_CUB_dom_sf (IPR035914) - T[1-77] 3.5E-8 |
| SUPERFAMILY |
Sperma_CUB_dom_sf (IPR035914) - T[7-80] 9.81E-8 |
| SMART |
MAM_dom (IPR000998) - T[84-253] 2.6E-30 |
| SUPERFAMILY |
ConA-like_dom_sf (IPR013320) - T[86-251] 2.06E-35 |
| ProSiteProfiles |
MAM_dom (IPR000998) - T[87-253] 32.891 |
| CDD |
MAM_dom (IPR000998) - T[89-251] 1.17607E-43 |
| Pfam |
MAM_dom (IPR000998) - T[89-252] 5.1E-36 |
| SUPERFAMILY |
LDL_receptor-like_sf (IPR036055) - T[290-328] 7.07E-9 |
| ProSiteProfiles |
LDrepeatLR_classA_rpt (IPR002172) - T[292-329] 12.438 |
| SMART |
LDrepeatLR_classA_rpt (IPR002172) - T[292-330] 1.2E-9 |
| Pfam |
LDrepeatLR_classA_rpt (IPR002172) - T[292-328] 1.3E-8 |
| CDD |
LDrepeatLR_classA_rpt (IPR002172) - T[293-328] 2.8963E-11 |
| ProSitePatterns |
LDLR_class-A_CS (IPR023415) - T[306-328] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| MDGA2_HUMAN | 32.967 % | 90.5 | 2.88E-19 |
| MDGA1_HUMAN | 32.941 % | 93.6 | 2.56E-20 |
| MALR1_HUMAN | 31.048 % | 113 | 8.96E-27 |