- Transcript 'KH2012:KH.L149.7.v1....' >
- Transcript 'KH2012:KH.C2.187.v4....' >
- Transcript 'KH2012:KH.C3.806.v1....' >
- Transcript 'Phmamm.CG.MTP2014.S2...' >
- Transcript 'Cisavi.CG.ENS81.R4.8...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R4.856294-864945.13784.t
Possible name(s)
PAX3; PAX6; PAX7
Gene model
Location
R4 [858,529 / 862,172]
Amino acid sequence
Length: 218
>Cisavi.CG.ENS81.R4.856294-864945.13784.p
HNGARPCDISRILQVSNGCVSKILARYYETGTIRPRAIGGSKPRVATPEVVNKIASYKRE
CPSIFAWEIRDRLLNEGTCNNDNIPSVSSINRVLRNLNGDQSNGFNERSVCNEVIPFTGE
KFLVFPINRSTTKVASHFPFDAAANSKINRVIMNQVGPRSIPACHRSIRSSRRPKTPSKF
RKETEENTKDGNSEARLQLKRKLQRNRTSFTQIQVEAL
Nucleotide sequence
Length: 654
>Cisavi.CG.ENS81.R4.856294-864945.13784.t
CACAATGGTGCGCGCCCTTGCGACATCTCGCGGATTCTTCAAGTATCTAACGGATGTGTC
AGTAAAATTCTTGCCAGGTACTACGAAACTGGAACCATTCGGCCCCGAGCAATTGGTGGC
AGCAAACCAAGAGTGGCCACCCCAGAAGTGGTCAACAAAATCGCATCCTACAAACGAGAA
TGCCCAAGCATATTTGCATGGGAAATAAGGGACAGACTACTGAACGAAGGAACCTGCAAT
AACGATAATATTCCAAGTGTTTCCTCGATTAACCGTGTTCTTCGAAATCTTAACGGCGAC
CAAAGCAACGGGTTCAATGAAAGAAGTGTTTGCAATGAAGTAATTCCTTTTACCGGCGAG
AAATTTCTTGTGTTTCCCATTAACCGCAGCACGACCAAGGTTGCCTCGCATTTCCCTTTT
GACGCTGCAGCTAATTCCAAGATAAACCGAGTTATTATGAATCAAGTTGGACCGCGATCG
ATACCGGCGTGTCATCGATCCATCCGCAGCTCCCGACGACCAAAAACTCCGTCGAAGTTT
CGTAAAGAGACTGAGGAAAACACAAAAGACGGAAACAGCGAAGCAAGACTTCAACTGAAG
AGAAAACTGCAGAGAAACCGAACCTCATTCACCCAAATACAAGTGGAAGCTCTG
| SUPERFAMILY |
Homeobox-like_sf (IPR009057) - T[1-96] 4.3E-27 |
| Gene3D |
WH-like_DNA-bd_sf (IPR036388) - T[1-39] 4.1E-19 - T[40-103] 2.1E-33 |
| Pfam |
Paired_dom (IPR001523) - T[1-95] 4.4E-51 |
| SMART |
Paired_dom (IPR001523) - T[1-95] 3.9E-52 |
| ProSiteProfiles |
Paired_dom (IPR001523) - T[1-97] 48.11 |
| ProSitePatterns |
Paired_dom (IPR001523) - T[5-21] . |
| PRINTS |
Paired_dom (IPR001523) - T[13-30] 1.5E-18 - T[31-48] 1.5E-18 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PAX2_HUMAN | 73.684 % | 159 | 6.66E-47 |
| PAX8_HUMAN | 73.684 % | 159 | 1.87E-46 |
| PAX6_HUMAN | 53.812 % | 210 | 1.67E-66 |