Aniseed - Transcript Card

Sequences

Amino acid sequence

Length: 548

>Cisavi.CG.ENS81.R48.2661595-2673828.18750.p
SNLSKSLEDMSQKEKEKFARENHSEIERRRRNKMTAYITELSDMVPSCSALARKPDKLTI
LRMAVSHMKQLRGAMGGGVENNYKPSFLTDQELKHLVLEAADGFLFVTACDSSQVVFVSD
TVTAVLSQAHSDWNNHLLYDLVHPDDVEKVKEQLCVSESQNTGRILDLKTGTVKKEGQQS
SVRMCMGSRRAFICRMRCGKSQLTSHMSSTRHYRAVNTLGPADDSKMAYAVTHVTGFIRA
WPPAGFGSDAQNDGLDDVSLGGTAGNYCLVAVARLQITSHPTFCEVNSNQDHSEFVSRHS
SDGTFTFVDLRVTSVLGYQPQDLLMKLPSEFYHPEDIEHMKESFKQVIVMKGQVISMMYR
FRSQSGDYVWLRTSSFVFQNPYNNEVEYVVSTNTLIKQPSSEHQMEALPEQKMIYSQPEP
VPEPPQHHSQQYPIQAELPPTEINYSPQNFGGSSQQQWTHTPVATSPGDFHQQPVQERFP
PNIGQVSGAGYPAAYDSPTMPMYGTNPQLQSTREAYSQESLMPMVDPNNPTYTHNDYNLP
MFTSFPPP

Nucleotide sequence

Length: 2,131

>Cisavi.CG.ENS81.R48.2661595-2673828.18750.t
TCCAATCTCAGCAAATCCCTTGAAGATATGTCTCAGAAGGAAAAGGAAAAGTTCGCTCGT
GAAAATCACTCTGAGATAGAGAGAAGGCGACGCAACAAAATGACGGCCTACATCACCGAG
CTCTCCGACATGGTGCCTTCATGCAGTGCTTTGGCCAGGAAGCCTGACAAGTTGACGATC
CTAAGAATGGCAGTGTCTCACATGAAACAACTAAGAGGCGCTATGGGTGGTGGGGTGGAG
AATAATTATAAGCCTTCCTTTCTAACTGACCAGGAGTTAAAACACCTTGTGTTGGAAGCT
GCCGATGGGTTCTTGTTTGTCACTGCTTGTGATTCAAGTCAAGTAGTTTTTGTTTCAGAC
ACAGTTACTGCTGTCTTGAGCCAGGCTCACTCAGACTGGAACAACCACCTGCTCTATGAC
CTTGTACATCCTGATGATGTAGAAAAGGTAAAAGAACAACTTTGTGTCTCGGAATCTCAA
AACACAGGTCGGATACTTGACTTGAAGACAGGAACAGTGAAGAAAGAAGGGCAGCAAAGC
TCCGTGCGGATGTGTATGGGTTCCCGTAGAGCCTTTATTTGCCGAATGAGATGTGGCAAG
TCCCAACTCACAAGTCATATGTCCTCGACAAGGCACTACCGTGCAGTCAACACCCTTGGT
CCCGCTGACGACAGTAAAATGGCTTACGCCGTGACCCATGTAACTGGTTTCATCCGTGCC
TGGCCCCCAGCTGGTTTCGGCTCGGATGCGCAAAATGACGGCTTGGACGACGTCTCTCTC
GGAGGAACAGCCGGGAATTATTGCTTAGTCGCCGTGGCGAGACTGCAGATAACAAGCCAC
CCGACGTTTTGCGAGGTGAATTCCAACCAGGATCACTCGGAGTTCGTATCTCGTCACAGC
TCAGATGGGACTTTCACCTTTGTTGATCTCAGGGTGACCAGTGTGTTGGGCTACCAACCA
CAGGATCTGCTGATGAAACTGCCATCTGAGTTCTACCACCCCGAGGATATAGAACACATG
AAAGAGAGTTTCAAACAAGTCATAGTCATGAAAGGACAGGTGATCTCCATGATGTATAGG
TTTCGTTCGCAGTCGGGTGATTACGTTTGGCTTCGAACGAGCTCATTTGTGTTCCAGAAC
CCCTATAATAATGAGGTCGAGTACGTGGTGTCAACCAATACTTTGATCAAACAACCCAGT
AGCGAACACCAAATGGAAGCTCTTCCAGAACAAAAGATGATCTACAGCCAGCCGGAACCA
GTTCCCGAACCCCCACAGCACCATTCTCAGCAGTACCCCATACAAGCTGAACTTCCTCCA
ACAGAAATAAACTATTCACCACAAAACTTTGGTGGAAGCAGCCAGCAGCAGTGGACTCAC
ACACCTGTAGCAACCTCCCCCGGTGACTTTCACCAACAACCTGTGCAAGAGCGATTTCCC
CCTAATATCGGGCAAGTGAGTGGAGCAGGATACCCAGCGGCGTACGACAGCCCAACTATG
CCCATGTATGGCACCAATCCCCAGCTACAATCCACAAGAGAAGCTTACTCCCAAGAATCC
CTCATGCCAATGGTTGACCCCAACAACCCGACCTACACCCACAATGACTATAACCTCCCT
ATGTTCACCTCTTTCCCCCCTCCATAGCCACACATACAAAGCAGTACCTACACCACCTCC
AAGAAGTGCACTTTGAACCACATGTTATGTATAAATCCGTTTGTTCGTTGTACAGTTGAA
GTCTAAAGTGCCCTTTTAGTTGTTCCTGCATTCTTATGCCTGAAAGCGTTTTCGCACTTT
TTAAAGGCAAACTTGAACTCGTTTTATTGTTTTTTTAATAATCATGAAATTGTACAGAAA
GAATTGTTTCTCGCAAGATAAAAGATTTTTCCGTTTTTATTCTTGTTTATTGATCTATTA
TTAATATGTGCCATTGCCACGTTTTTAGTACCCATAGCATTTTTCTAGTCGATTATCTTT
TTGGGACAATATTGCTGCTGTTGAACTTTTAAAGCATATTGTAATTCTTACTCTAACGGT
CCAGCACTTTGGCATGAGTAATAATGGTTAGCAAGAAAAAACATGTAAAAATATTGTTAC
CTTTTTAATGCTGTTAAAATACGTAGGTAAA

InterProScan

Gene3D	HLH_DNA-bd_sf (IPR036638) - T[7-74] 8.2E-22
ProSiteProfiles	bHLH_dom (IPR011598) - T[18-71] 16.971
SUPERFAMILY	HLH_DNA-bd_sf (IPR036638) - T[20-102] 3.27E-15
Pfam	bHLH_dom (IPR011598) - T[20-71] 6.2E-15
CDD	bHLH_dom (IPR011598) - T[20-72] 5.10181E-15
SMART	bHLH_dom (IPR011598) - T[24-77] 3.0E-13
PRINTS	Nuc_translocat (IPR001067) - T[33-48] 4.4E-77 - T[53-73] 4.4E-77 - T[83-106] 4.4E-77 - T[108-127] 4.4E-77 - T[140-158] 4.4E-77 - T[186-199] 4.4E-77 - T[229-248] 4.4E-77 - T[294-311] 4.4E-77
ProSiteProfiles	PAS (IPR000014) - T[90-163] 9.717 - T[300-351] 13.001
SMART	PAS (IPR000014) - T[92-159] 0.008 - T[281-349] 1.4E-5
Pfam	PAS_fold (IPR013767) - T[96-198] 8.8E-8
CDD	PAS (IPR000014) - T[101-190] 1.09898E-5 - T[293-391] 3.85129E-15
SUPERFAMILY	PAS-like_dom_sf (IPR035965) - T[102-156] 7.78E-9 - T[183-204] 7.78E-9 - T[294-396] 1.54E-25
TIGRFAM	PAS (IPR000014) - T[299-388] 2.9E-8
SMART	PAC (IPR001610) - T[356-399] 1.0E-5