- Transcript 'KH2012:KH.C1.330.v3....' >
- Transcript 'Cisavi.CG.ENS81.R48....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R48.2435912-2440640.18670.t
Possible name(s)
DMRT1; DMRTA1; DMRTA2
Gene model
Location
R48 [2,435,911 / 2,440,640]
Amino acid sequence
Length: 568
>Cisavi.CG.ENS81.R48.2435912-2440640.18670.p
MSSDRGVELSEAARHMRGDAYSSAMMSSSSAHSSYAGLAQAVSNPAAAALFLRASDKYPR
TPKCARCRNHGVVSALKGHKRYCRWKDCLCPKCTLIAERQRVMAAQVALRRQQAQEENET
RELRLLYGAAQGLGPMDQQRMASIVPPTSGEVAQASQRSPLITTSCNDQASPTGAKRARM
DFYDGISTTSPTGLPSSPVEFRPSHSSSPTEPQNINSVDGKSTPSPVLRAVNDAVNTEQK
FKHETKSDDAENPQQHLTGNLPNQEALEQNEASIEISPSQAHQSRSSLSMLCRVFPQKKP
SELDTILRLCKGDVVKAKRTLNNEETAKPRSRKRPSSHSPIEINNISSSSISPTGLPVTR
LLQYSPHGNRSDSPHSSIGCESATPPTPGTSAQSNHIAPYQFHTSTPTHFKSAFHPMSND
AVESSTPNLLAANITGAFNVATRPRNMHNLAPTQPTGRFQMGNFNALNPFAAYNAQSQHP
AARGMNAFGMSPYVASSFMPSLAAAAAAGFRSHPAVQGLAKDYTFSGFMRGMSAMAYNKE
KLGYSNGIPSSFRFDSSASEASTCSSDK
Nucleotide sequence
Length: 1,707
>Cisavi.CG.ENS81.R48.2435912-2440640.18670.t
ATGTCAAGCGACAGAGGAGTTGAGTTAAGCGAAGCAGCCCGACATATGAGAGGAGACGCT
TATAGCTCAGCAATGATGTCCAGCTCATCCGCCCACAGTAGCTACGCCGGCCTGGCCCAG
GCTGTATCAAACCCGGCGGCGGCAGCCTTATTTCTCCGAGCCTCCGATAAATACCCGAGG
ACCCCGAAGTGCGCTCGGTGCAGGAACCACGGCGTTGTAAGCGCCCTCAAAGGACACAAA
CGCTACTGCAGATGGAAGGACTGCTTGTGCCCGAAGTGCACGCTCATAGCTGAACGACAA
CGCGTCATGGCGGCCCAGGTCGCTCTTCGTCGCCAGCAGGCCCAGGAGGAAAACGAAACC
CGCGAACTGAGGTTGTTGTATGGTGCAGCACAAGGGCTGGGACCAATGGATCAGCAACGC
ATGGCGTCCATTGTTCCACCGACTTCGGGAGAAGTCGCTCAGGCCAGTCAACGCTCGCCC
TTGATCACAACTTCGTGTAATGACCAGGCATCGCCTACAGGTGCAAAACGGGCAAGAATG
GATTTTTATGACGGAATCAGCACGACTTCGCCAACTGGACTTCCGTCATCTCCGGTCGAG
TTCCGCCCCTCCCACAGTTCATCTCCGACGGAACCCCAAAATATCAATTCCGTTGACGGA
AAATCGACACCTTCGCCAGTTCTGCGGGCGGTAAATGACGCCGTGAATACCGAACAGAAA
TTCAAACACGAAACAAAGAGCGACGACGCGGAAAATCCACAACAACATCTCACAGGAAAT
CTTCCGAATCAAGAAGCTTTGGAACAAAACGAAGCTTCAATCGAAATTTCACCATCTCAA
GCCCACCAATCTCGATCAAGCCTGTCAATGTTGTGCCGCGTCTTTCCACAAAAGAAACCT
TCTGAACTGGACACTATCCTAAGACTGTGCAAAGGGGACGTTGTAAAAGCCAAAAGGACA
CTAAACAACGAGGAAACTGCAAAACCAAGATCGCGTAAACGACCCAGTTCTCACTCCCCA
ATAGAAATCAACAATATTTCTTCATCTTCGATCAGTCCAACCGGGCTACCTGTAACAAGG
CTACTACAATACAGCCCCCATGGTAACAGGTCCGACAGTCCACACTCCAGTATTGGATGC
GAAAGCGCTACACCTCCAACCCCCGGTACTTCTGCACAGAGTAACCACATCGCTCCGTAC
CAGTTCCACACATCCACGCCAACACATTTCAAGTCCGCTTTCCACCCGATGTCTAACGAC
GCAGTGGAATCAAGCACTCCGAATCTGCTTGCCGCTAACATCACCGGCGCGTTTAACGTC
GCAACACGGCCTCGCAACATGCACAACTTGGCGCCGACACAGCCAACTGGACGTTTCCAA
ATGGGCAATTTCAATGCGTTGAATCCCTTCGCAGCGTACAACGCCCAGTCGCAGCACCCA
GCAGCAAGAGGCATGAACGCGTTCGGTATGTCACCCTACGTTGCTTCCAGTTTCATGCCG
AGTCTTGCAGCCGCTGCCGCTGCTGGCTTTCGAAGTCACCCTGCAGTACAAGGCCTTGCC
AAGGATTACACGTTCAGTGGCTTCATGCGAGGAATGAGCGCAATGGCCTATAACAAGGAA
AAACTTGGCTACAGCAACGGTATCCCGAGCAGTTTTAGATTCGATTCCTCGGCGTCCGAA
GCATCCACTTGCTCCAGCGACAAGTAA
| PANTHER |
DMRT/dsx/mab-3 (IPR026607) - T[23-358] 1.1E-66 - T[481-536] 1.1E-66 |
| Gene3D |
DM_DNA-bd_sf (IPR036407) - T[57-106] 2.0E-23 |
| SUPERFAMILY |
DM_DNA-bd_sf (IPR036407) - T[58-106] 1.27E-17 |
| SMART |
DM_DNA-bd (IPR001275) - T[60-113] 5.8E-28 |
| Pfam |
DM_DNA-bd (IPR001275) - T[60-106] 1.5E-22 |
| ProSiteProfiles |
DM_DNA-bd (IPR001275) - T[64-111] 14.371 |
| ProSitePatterns |
DM_DNA-bd (IPR001275) - T[64-93] . |
| Pfam |
DMA (IPR005173) - T[285-317] 1.2E-12 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| DMTA2_HUMAN | 40.789 % | 180 | 5.94E-50 |
| DMRTA_HUMAN | 88.571 % | 138 | 4.15E-35 |
| DMRT1_HUMAN | 79.688 % | 117 | 6.86E-29 |