- Transcript 'Cisavi.CG.ENS81.R48....' >
- Transcript 'Moocul.CG.ELv1_2.S72...' >
- EST 'AHC0AAA220YJ03_RM1' >
- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'Cisavi.CG.ENS81.R48....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R48.2152627-2164543.18432.t
Possible name(s)
NVL; SPATA5; VCP
Gene model
Location
R48 [2,153,413 / 2,164,163]
Amino acid sequence
Length: 808
>Cisavi.CG.ENS81.R48.2152627-2164543.18432.p
FACKLILISFSEKDEKDLATAILRTKSKPNRLIVEDAVVDDNSVVSLSPAKMEELQLFRA
DTVLLKGKKRKETVCVALSEDNISNEKIRINRVVRKNLRVRIGDVVSIQACPDVKYGAKI
HVLPIDDTVEGITGNLFEVYLKPYFLEAYRPVYKGDVFLVRGGMRAVEFKVVETDPNPYC
VVSPETVIHCEGEPIKREDEEESLNEVGYDDIGGVRKQLAQIKEMVELPLRHPALFKAIG
IKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRRAFEEAE
KNAPAIIFIDELDAIAPKRDKTHGEVERRIVSQLLTLMDGLKQRAHVVVMAATNRPNSID
AALRRFGRFDREVDIGIPDATGRLEILRIHTKNMKLADDVDLEQVAAESHGHVGADLAAL
CSEAALQQIRGKMDLIDLEDETIDAEVMDNLAVTMEDFRFAMAQSNPSALRETVVEIPNT
TWDDIGGLDTVKTELQELVQYPVEHPEKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANE
CQANFISIKGPEMLTMWFGESEANVREVFDKARQAAPCVLFFDELDSIAKARGGSVGDGG
GAGDRVINQILTEMDGMSGKKNVFIIGATNRPDIIDSAILRPGRLDQLIYIPLPDEKSRI
QILKANLRKSPVAKDVDLMLMAKVTKGFSGADLTEICQRACKLAIRENIEKDIKRERERA
RNGESNMEEEDLVPEIRRDHFEEAMRFARRSVTDKDIRKYEMFAQTLQQARGFGNFRFAF
PNIAPSSGGPAAAGAGDLYEDEEDDLYS
Nucleotide sequence
Length: 2,427
>Cisavi.CG.ENS81.R48.2152627-2164543.18432.t
TTTGCATGTAAATTAATTCTTATTTCTTTTAGTGAAAAGGATGAAAAAGATTTAGCAACA
GCGATTCTAAGAACGAAGAGCAAACCAAATCGATTGATCGTTGAAGATGCGGTTGTCGAT
GATAACAGCGTTGTTTCTTTATCTCCAGCAAAAATGGAGGAACTGCAACTTTTCCGAGCC
GACACTGTGTTGCTTAAGGGCAAGAAACGAAAAGAAACTGTTTGTGTCGCTCTGTCTGAA
GATAACATTTCCAACGAAAAGATTAGAATCAACAGAGTGGTGCGGAAAAACTTGCGCGTT
AGAATCGGTGATGTTGTAAGCATTCAGGCATGTCCGGATGTTAAGTATGGAGCGAAGATT
CACGTCCTCCCGATAGACGACACAGTTGAAGGGATTACTGGAAACTTGTTTGAGGTTTAC
CTCAAACCGTACTTTCTGGAGGCTTACCGCCCAGTATACAAGGGGGACGTTTTCCTGGTT
CGTGGGGGAATGAGAGCAGTGGAGTTCAAAGTGGTGGAAACCGATCCAAACCCATATTGC
GTGGTATCACCCGAGACCGTCATCCACTGCGAAGGGGAACCGATAAAGCGAGAGGATGAA
GAGGAGTCGTTGAACGAGGTCGGATACGATGACATCGGGGGAGTTCGGAAGCAACTTGCT
CAGATCAAGGAAATGGTAGAATTGCCCCTCAGACACCCAGCTCTATTTAAGGCCATTGGT
ATCAAACCACCAAGGGGGATTCTCCTCTATGGACCACCTGGTACTGGAAAAACTTTGATT
GCACGAGCTGTTGCCAATGAAACCGGCGCATTTTTCTTTCTTATCAATGGACCGGAGATT
ATGAGCAAGTTGGCTGGAGAGTCAGAATCGAATCTACGAAGAGCGTTTGAGGAAGCGGAG
AAGAACGCTCCTGCCATCATCTTCATCGATGAGCTCGATGCCATTGCACCCAAGCGAGAC
AAGACCCACGGAGAAGTCGAGCGTCGTATCGTCTCCCAACTCCTCACCCTCATGGACGGG
TTGAAACAGCGCGCTCATGTGGTAGTGATGGCGGCGACGAACCGTCCCAACTCGATCGAC
GCCGCTCTGCGTCGTTTCGGACGATTCGATCGCGAGGTGGACATCGGCATCCCGGATGCG
ACTGGAAGATTGGAGATCCTCCGTATCCACACCAAGAACATGAAGCTTGCAGATGATGTG
GACTTGGAACAGGTGGCCGCCGAGTCCCATGGACACGTCGGAGCCGATCTTGCTGCTCTG
TGCTCGGAGGCGGCGCTCCAGCAGATCCGAGGGAAGATGGACCTCATCGACCTCGAAGAT
GAAACGATCGACGCAGAAGTGATGGACAATCTCGCCGTCACTATGGAGGACTTCCGGTTT
GCGATGGCGCAAAGCAACCCATCTGCACTCCGTGAAACCGTCGTCGAGATTCCTAACACA
ACTTGGGACGACATTGGTGGGCTGGATACTGTGAAAACTGAACTGCAAGAACTTGTTCAG
TATCCCGTTGAGCACCCAGAGAAGTTCCTAAAGTTCGGCATGACTCCATCCAAGGGAGTT
TTGTTCTACGGACCCCCTGGCTGCGGTAAAACCCTCCTTGCGAAGGCCATTGCCAACGAG
TGCCAGGCCAACTTCATATCGATCAAAGGACCGGAGATGCTGACAATGTGGTTTGGTGAA
TCGGAGGCAAACGTCCGAGAAGTCTTTGACAAGGCAAGACAAGCTGCACCGTGCGTGTTG
TTCTTCGATGAGTTGGACTCGATTGCGAAGGCCCGGGGTGGAAGTGTGGGTGACGGGGGT
GGTGCGGGGGACCGTGTCATCAACCAAATCCTCACTGAGATGGACGGAATGTCGGGCAAG
AAAAATGTGTTCATCATCGGGGCAACCAATCGACCGGACATCATCGACTCCGCGATACTC
CGACCCGGACGTCTGGATCAGCTCATCTACATCCCACTTCCCGATGAGAAATCTCGAATT
CAAATCCTCAAGGCAAACCTCCGAAAATCTCCAGTCGCCAAGGATGTCGACCTCATGTTG
ATGGCAAAAGTGACGAAGGGATTTAGTGGAGCTGATTTGACCGAGATTTGCCAGCGTGCG
TGCAAACTTGCCATCCGTGAAAACATCGAGAAAGATATTAAACGGGAGAGAGAACGTGCA
AGAAATGGGGAGAGCAACATGGAGGAAGAGGATTTGGTTCCGGAGATCCGCAGAGATCAC
TTCGAGGAGGCGATGCGATTCGCTCGTCGATCTGTGACGGATAAAGACATCCGGAAATAC
GAGATGTTTGCCCAGACACTACAGCAAGCGCGTGGATTCGGGAACTTCAGGTTTGCTTTC
CCCAACATCGCTCCATCCAGTGGTGGACCTGCTGCTGCAGGAGCAGGGGATCTTTATGAG
GATGAAGAAGACGACCTCTACAGTTGA
| SUPERFAMILY |
Asp_de-COase-like_dom_sf (IPR009010) - T[28-111] 9.94E-26 |
| SMART |
CDC4_N-term_subdom (IPR003338) - T[31-114] 2.8E-25 |
| Pfam |
CDC4_N-term_subdom (IPR003338) - T[31-112] 1.7E-19 |
| TIGRFAM |
AAA_ATPase_CDC48 (IPR005938) - T[43-769] 3.6E-254 |
| SUPERFAMILY |
CDC48_domain_2-like_sf (IPR029067) - T[113-204] 4.9E-34 |
| SMART |
Cdc48_dom2 (IPR004201) - T[131-197] 1.4E-15 |
| Pfam |
Cdc48_dom2 (IPR004201) - T[132-196] 5.2E-12 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[206-468] 2.17E-64 - T[478-766] 3.02E-74 |
| SMART |
AAA+_ATPase (IPR003593) - T[243-379] 3.5E-23 - T[516-655] 1.6E-24 |
| Pfam |
ATPase_AAA_core (IPR003959) - T[247-376] 5.8E-46 - T[520-653] 6.7E-46 |
| ProSitePatterns |
ATPase_AAA_CS (IPR003960) - T[347-365] . - T[623-641] . |
| Pfam |
Vps4_C (IPR015415) - T[730-765] 2.7E-5 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SPAT5_HUMAN | 49.715 % | 543 | 0 |
| TERA_HUMAN | 85.786 % | 1343 | 0 |
| NVL_HUMAN | 42.071 % | 464 | 1.56E-151 |