- Transcript 'Moocul.CG.ELv1_2.S72...' >
- EST 'AHC0AAA220YJ03_RM1' >
- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'Cisavi.CG.ENS81.R48....' >
- Transcript 'Cisavi.CG.ENS81.R48....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R48.2152627-2164543.18431.t
Possible name(s)
NVL; SPATA5; VCP
Gene model
Location
R48 [2,153,227 / 2,164,163]
Amino acid sequence
Length: 832
>Cisavi.CG.ENS81.R48.2152627-2164543.18431.p
KSSDHAPKLSYQYIPPVEKDEKDLATAILRTKSKPNRLIVEDAVVDDNSVVSLSPAKMEE
LQLFRADTVLLKGKKRKETVCVALSEDNISNEKIRINRVVRKNLRVRIGDVVSIQACPDV
KYGAKIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPVYKGDVFLVRGGMRAVEFKVVET
DPNPYCVVSPETVIHCEGEPIKREDEEESLNEVGYDDIGGVRKQLAQIKEMVELPLRHPA
LFKAIGIKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRR
AFEEAEKNAPAIIFIDELDAIAPKRDKTHGEVERRIVSQLLTLMDGLKQRAHVVVMAATN
RPNSIDAALRRFGRFDREVDIGIPDATGRLEILRIHTKNMKLADDVDLEQVAAESHGHVG
ADLAALCSEAALQQIRGKMDLIDLEDETIDAEVMDNLAVTMEDFRFAMAQSNPSALRETV
VEIPNTTWDDIGGLDTVKTELQELVQYPVEHPEKFLKFGMTPSKGVLFYGPPGCGKTLLA
KAIANECQANFISIKGPEMLTMWFGESEANVREVFDKARQAAPCVLFFDELDSIAKARGG
SVGDGGGAGDRVINQILTEMDGMSGKKNVFIIGATNRPDIIDSAILRPGRLDQLIYIPLP
DEKSRIQILKANLRKSPVAKDVDLMLMAKVTKGFSGADLTEICQRACKLAIRENIEKDIK
RERERARNGESNMVSLTGTDFDEEEEDLVPEIRRDHFEEAMRFARRSVTDKDIRKYEMFA
QTLQQARGFGNFRFVDGVLVTRVCHNVAPSSGGPAAAGAGDLYEDEEDDLYS
Nucleotide sequence
Length: 2,499
>Cisavi.CG.ENS81.R48.2152627-2164543.18431.t
AAGTCATCAGACCATGCTCCAAAACTTAGTTATCAATATATTCCGCCAGTTGAAAAGGAT
GAAAAAGATTTAGCAACAGCGATTCTAAGAACGAAGAGCAAACCAAATCGATTGATCGTT
GAAGATGCGGTTGTCGATGATAACAGCGTTGTTTCTTTATCTCCAGCAAAAATGGAGGAA
CTGCAACTTTTCCGAGCCGACACTGTGTTGCTTAAGGGCAAGAAACGAAAAGAAACTGTT
TGTGTCGCTCTGTCTGAAGATAACATTTCCAACGAAAAGATTAGAATCAACAGAGTGGTG
CGGAAAAACTTGCGCGTTAGAATCGGTGATGTTGTAAGCATTCAGGCATGTCCGGATGTT
AAGTATGGAGCGAAGATTCACGTCCTCCCGATAGACGACACAGTTGAAGGGATTACTGGA
AACTTGTTTGAGGTTTACCTCAAACCGTACTTTCTGGAGGCTTACCGCCCAGTATACAAG
GGGGACGTTTTCCTGGTTCGTGGGGGAATGAGAGCAGTGGAGTTCAAAGTGGTGGAAACC
GATCCAAACCCATATTGCGTGGTATCACCCGAGACCGTCATCCACTGCGAAGGGGAACCG
ATAAAGCGAGAGGATGAAGAGGAGTCGTTGAACGAGGTCGGATACGATGACATCGGGGGA
GTTCGGAAGCAACTTGCTCAGATCAAGGAAATGGTAGAATTGCCCCTCAGACACCCAGCT
CTATTTAAGGCCATTGGTATCAAACCACCAAGGGGGATTCTCCTCTATGGACCACCTGGT
ACTGGAAAAACTTTGATTGCACGAGCTGTTGCCAATGAAACCGGCGCATTTTTCTTTCTT
ATCAATGGACCGGAGATTATGAGCAAGTTGGCTGGAGAGTCAGAATCGAATCTACGAAGA
GCGTTTGAGGAAGCGGAGAAGAACGCTCCTGCCATCATCTTCATCGATGAGCTCGATGCC
ATTGCACCCAAGCGAGACAAGACCCACGGAGAAGTCGAGCGTCGTATCGTCTCCCAACTC
CTCACCCTCATGGACGGGTTGAAACAGCGCGCTCATGTGGTAGTGATGGCGGCGACGAAC
CGTCCCAACTCGATCGACGCCGCTCTGCGTCGTTTCGGACGATTCGATCGCGAGGTGGAC
ATCGGCATCCCGGATGCGACTGGAAGATTGGAGATCCTCCGTATCCACACCAAGAACATG
AAGCTTGCAGATGATGTGGACTTGGAACAGGTGGCCGCCGAGTCCCATGGACACGTCGGA
GCCGATCTTGCTGCTCTGTGCTCGGAGGCGGCGCTCCAGCAGATCCGAGGGAAGATGGAC
CTCATCGACCTCGAAGATGAAACGATCGACGCAGAAGTGATGGACAATCTCGCCGTCACT
ATGGAGGACTTCCGGTTTGCGATGGCGCAAAGCAACCCATCTGCACTCCGTGAAACCGTC
GTCGAGATTCCTAACACAACTTGGGACGACATTGGTGGGCTGGATACTGTGAAAACTGAA
CTGCAAGAACTTGTTCAGTATCCCGTTGAGCACCCAGAGAAGTTCCTAAAGTTCGGCATG
ACTCCATCCAAGGGAGTTTTGTTCTACGGACCCCCTGGCTGCGGTAAAACCCTCCTTGCG
AAGGCCATTGCCAACGAGTGCCAGGCCAACTTCATATCGATCAAAGGACCGGAGATGCTG
ACAATGTGGTTTGGTGAATCGGAGGCAAACGTCCGAGAAGTCTTTGACAAGGCAAGACAA
GCTGCACCGTGCGTGTTGTTCTTCGATGAGTTGGACTCGATTGCGAAGGCCCGGGGTGGA
AGTGTGGGTGACGGGGGTGGTGCGGGGGACCGTGTCATCAACCAAATCCTCACTGAGATG
GACGGAATGTCGGGCAAGAAAAATGTGTTCATCATCGGGGCAACCAATCGACCGGACATC
ATCGACTCCGCGATACTCCGACCCGGACGTCTGGATCAGCTCATCTACATCCCACTTCCC
GATGAGAAATCTCGAATTCAAATCCTCAAGGCAAACCTCCGAAAATCTCCAGTCGCCAAG
GATGTCGACCTCATGTTGATGGCAAAAGTGACGAAGGGATTTAGTGGAGCTGATTTGACC
GAGATTTGCCAGCGTGCGTGCAAACTTGCCATCCGTGAAAACATCGAGAAAGATATTAAA
CGGGAGAGAGAACGTGCAAGAAATGGGGAGAGCAACATGGTAAGCTTGACCGGAACTGAT
TTTGATGAGGAGGAAGAGGATTTGGTTCCGGAGATCCGCAGAGATCACTTCGAGGAGGCG
ATGCGATTCGCTCGTCGATCTGTGACGGATAAAGACATCCGGAAATACGAGATGTTTGCC
CAGACACTACAGCAAGCGCGTGGATTCGGGAACTTCAGGTTTGTAGATGGAGTTCTTGTA
ACTCGTGTTTGCCATAATGTCGCTCCATCCAGTGGTGGACCTGCTGCTGCAGGAGCAGGG
GATCTTTATGAGGATGAAGAAGACGACCTCTACAGTTGA
| SUPERFAMILY |
Asp_de-COase-like_dom_sf (IPR009010) - T[34-117] 1.08E-25 |
| Pfam |
CDC4_N-term_subdom (IPR003338) - T[37-118] 1.8E-19 |
| SMART |
CDC4_N-term_subdom (IPR003338) - T[37-120] 2.8E-25 |
| TIGRFAM |
AAA_ATPase_CDC48 (IPR005938) - T[49-785] 7.2E-254 |
| SUPERFAMILY |
CDC48_domain_2-like_sf (IPR029067) - T[119-210] 4.9E-34 |
| SMART |
Cdc48_dom2 (IPR004201) - T[137-203] 1.4E-15 |
| Pfam |
Cdc48_dom2 (IPR004201) - T[138-202] 5.4E-12 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[212-474] 2.29E-64 - T[484-781] 3.21E-73 |
| SMART |
AAA+_ATPase (IPR003593) - T[249-385] 3.5E-23 - T[522-661] 1.6E-24 |
| Pfam |
ATPase_AAA_core (IPR003959) - T[253-382] 6.1E-46 - T[526-659] 7.0E-46 |
| ProSitePatterns |
ATPase_AAA_CS (IPR003960) - T[353-371] . - T[629-647] . |
| Pfam |
Vps4_C (IPR015415) - T[731-781] 4.6E-6 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SPAT5_HUMAN | 49.715 % | 544 | 0 |
| TERA_HUMAN | 86.71 % | 1342 | 0 |
| NVL_HUMAN | 41.401 % | 462 | 3.44E-150 |