- Clone 'AHC0AAA147YL12' >
- Clone 'AHC0AAA26YI06' >
- Transcript 'Cisavi.CG.ENS81.R48....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R48.2152627-2164543.18430.t
Possible name(s)
NVL; SPATA5; VCP
Gene model
Location
R48 [2,152,626 / 2,164,543]
Amino acid sequence
Length: 809
>Cisavi.CG.ENS81.R48.2152627-2164543.18430.p
MAAKGGEKDEKDLATAILRTKSKPNRLIVEDAVVDDNSVVSLSPAKMEELQLFRADTVLL
KGKKRKETVCVALSEDNISNEKIRINRVVRKNLRVRIGDVVSIQACPDVKYGAKIHVLPI
DDTVEGITGNLFEVYLKPYFLEAYRPVYKGDVFLVRGGMRAVEFKVVETDPNPYCVVSPE
TVIHCEGEPIKREDEEESLNEVGYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGIKPPR
GILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRRAFEEAEKNAPA
IIFIDELDAIAPKRDKTHGEVERRIVSQLLTLMDGLKQRAHVVVMAATNRPNSIDAALRR
FGRFDREVDIGIPDATGRLEILRIHTKNMKLADDVDLEQVAAESHGHVGADLAALCSEAA
LQQIRGKMDLIDLEDETIDAEVMDNLAVTMEDFRFAMAQSNPSALRETVVEIPNTTWDDI
GGLDTVKTELQELVQYPVEHPEKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANF
ISIKGPEMLTMWFGESEANVREVFDKARQAAPCVLFFDELDSIAKARGGSVGDGGGAGDR
VINQILTEMDGMSGKKNVFIIGATNRPDIIDSAILRPGRLDQLIYIPLPDEKSRIQILKA
NLRKSPVAKDVDLMLMAKVTKGFSGADLTEICQRACKLAIRENIEKDIKRERERARNGES
NMDFDEEEEDLVPEIRRDHFEEAMRFARRSVTDKDIRKYEMFAQTLQQARGFGNFSFGRQ
SGPSAPSSGGPAAAGAGDLYEDEEDDLYS
Nucleotide sequence
Length: 2,925
>Cisavi.CG.ENS81.R48.2152627-2164543.18430.t
GTTAACTTGGATTTTTGACTGTTTAGCTTAATTTTTTGAACTGCTGCTATAATAAGGTGC
TGGCTTGTGTATTTATAGAAGATAAAACTTATTTTGAACTGAATTTTTAAGCAAAATGGC
AGCTAAAGGAGGTGAAAAGGATGAAAAAGATTTAGCAACAGCGATTCTAAGAACGAAGAG
CAAACCAAATCGATTGATCGTTGAAGATGCGGTTGTCGATGATAACAGCGTTGTTTCTTT
ATCTCCAGCAAAAATGGAGGAACTGCAACTTTTCCGAGCCGACACTGTGTTGCTTAAGGG
CAAGAAACGAAAAGAAACTGTTTGTGTCGCTCTGTCTGAAGATAACATTTCCAACGAAAA
GATTAGAATCAACAGAGTGGTGCGGAAAAACTTGCGCGTTAGAATCGGTGATGTTGTAAG
CATTCAGGCATGTCCGGATGTTAAGTATGGAGCGAAGATTCACGTCCTCCCGATAGACGA
CACAGTTGAAGGGATTACTGGAAACTTGTTTGAGGTTTACCTCAAACCGTACTTTCTGGA
GGCTTACCGCCCAGTATACAAGGGGGACGTTTTCCTGGTTCGTGGGGGAATGAGAGCAGT
GGAGTTCAAAGTGGTGGAAACCGATCCAAACCCATATTGCGTGGTATCACCCGAGACCGT
CATCCACTGCGAAGGGGAACCGATAAAGCGAGAGGATGAAGAGGAGTCGTTGAACGAGGT
CGGATACGATGACATCGGGGGAGTTCGGAAGCAACTTGCTCAGATCAAGGAAATGGTAGA
ATTGCCCCTCAGACACCCAGCTCTATTTAAGGCCATTGGTATCAAACCACCAAGGGGGAT
TCTCCTCTATGGACCACCTGGTACTGGAAAAACTTTGATTGCACGAGCTGTTGCCAATGA
AACCGGCGCATTTTTCTTTCTTATCAATGGACCGGAGATTATGAGCAAGTTGGCTGGAGA
GTCAGAATCGAATCTACGAAGAGCGTTTGAGGAAGCGGAGAAGAACGCTCCTGCCATCAT
CTTCATCGATGAGCTCGATGCCATTGCACCCAAGCGAGACAAGACCCACGGAGAAGTCGA
GCGTCGTATCGTCTCCCAACTCCTCACCCTCATGGACGGGTTGAAACAGCGCGCTCATGT
GGTAGTGATGGCGGCGACGAACCGTCCCAACTCGATCGACGCCGCTCTGCGTCGTTTCGG
ACGATTCGATCGCGAGGTGGACATCGGCATCCCGGATGCGACTGGAAGATTGGAGATCCT
CCGTATCCACACCAAGAACATGAAGCTTGCAGATGATGTGGACTTGGAACAGGTGGCCGC
CGAGTCCCATGGACACGTCGGAGCCGATCTTGCTGCTCTGTGCTCGGAGGCGGCGCTCCA
GCAGATCCGAGGGAAGATGGACCTCATCGACCTCGAAGATGAAACGATCGACGCAGAAGT
GATGGACAATCTCGCCGTCACTATGGAGGACTTCCGGTTTGCGATGGCGCAAAGCAACCC
ATCTGCACTCCGTGAAACCGTCGTCGAGATTCCTAACACAACTTGGGACGACATTGGTGG
GCTGGATACTGTGAAAACTGAACTGCAAGAACTTGTTCAGTATCCCGTTGAGCACCCAGA
GAAGTTCCTAAAGTTCGGCATGACTCCATCCAAGGGAGTTTTGTTCTACGGACCCCCTGG
CTGCGGTAAAACCCTCCTTGCGAAGGCCATTGCCAACGAGTGCCAGGCCAACTTCATATC
GATCAAAGGACCGGAGATGCTGACAATGTGGTTTGGTGAATCGGAGGCAAACGTCCGAGA
AGTCTTTGACAAGGCAAGACAAGCTGCACCGTGCGTGTTGTTCTTCGATGAGTTGGACTC
GATTGCGAAGGCCCGGGGTGGAAGTGTGGGTGACGGGGGTGGTGCGGGGGACCGTGTCAT
CAACCAAATCCTCACTGAGATGGACGGAATGTCGGGCAAGAAAAATGTGTTCATCATCGG
GGCAACCAATCGACCGGACATCATCGACTCCGCGATACTCCGACCCGGACGTCTGGATCA
GCTCATCTACATCCCACTTCCCGATGAGAAATCTCGAATTCAAATCCTCAAGGCAAACCT
CCGAAAATCTCCAGTCGCCAAGGATGTCGACCTCATGTTGATGGCAAAAGTGACGAAGGG
ATTTAGTGGAGCTGATTTGACCGAGATTTGCCAGCGTGCGTGCAAACTTGCCATCCGTGA
AAACATCGAGAAAGATATTAAACGGGAGAGAGAACGTGCAAGAAATGGGGAGAGCAACAT
GGATTTTGATGAGGAGGAAGAGGATTTGGTTCCGGAGATCCGCAGAGATCACTTCGAGGA
GGCGATGCGATTCGCTCGTCGATCTGTGACGGATAAAGACATCCGGAAATACGAGATGTT
TGCCCAGACACTACAGCAAGCGCGTGGATTCGGGAACTTCAGTTTTGGCCGACAATCTGG
TCCAAGCGCTCCATCCAGTGGTGGACCTGCTGCTGCAGGAGCAGGGGATCTTTATGAGGA
TGAAGAAGACGACCTCTACAGTTGAATCAATCGTTCAAATCGGACTTTGACTTTTTAATT
TTGCTGCTTTGTGACAACTTTATAATTTCCACAATAGTTACTACTCAGAATTAAAAAAAA
CTAGGGCTATGTAGAATTTAGAAAATTTTATTTCAAAAAAATGTTTTTTTGTCATCTGAC
CCGGAGCTTTAAATGTAATTAGAAAATGTGTATTACCTTGTCCTTTTAAGTGAGTAGTAC
AAATGTTTATTTAAAGGATGCTTCTAAAAAAAATATTTATTCCAAATAATTCCGTTTTGA
TATTCTTAATTGCAATATTTCCTTTTAAAAAATTCAGTCTCCAGTTGTAAATATAAATGG
ACAATCTTCATATTACAAGGACGGTTCCTGTGGTCGTTCCACTCT
| SUPERFAMILY |
Asp_de-COase-like_dom_sf (IPR009010) - T[23-106] 9.94E-26 |
| SMART |
CDC4_N-term_subdom (IPR003338) - T[26-109] 2.8E-25 |
| Pfam |
CDC4_N-term_subdom (IPR003338) - T[26-107] 1.7E-19 |
| TIGRFAM |
AAA_ATPase_CDC48 (IPR005938) - T[38-768] 8.3E-254 |
| SUPERFAMILY |
CDC48_domain_2-like_sf (IPR029067) - T[108-199] 4.9E-34 |
| SMART |
Cdc48_dom2 (IPR004201) - T[126-192] 1.4E-15 |
| Pfam |
Cdc48_dom2 (IPR004201) - T[127-191] 5.2E-12 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[201-463] 2.17E-64 - T[473-765] 1.81E-74 |
| SMART |
AAA+_ATPase (IPR003593) - T[238-374] 3.5E-23 - T[511-650] 1.6E-24 |
| Pfam |
ATPase_AAA_core (IPR003959) - T[242-371] 5.8E-46 - T[515-648] 6.7E-46 |
| ProSitePatterns |
ATPase_AAA_CS (IPR003960) - T[342-360] . - T[618-636] . |
| Pfam |
Vps4_C (IPR015415) - T[722-764] 8.9E-6 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SPAT5_HUMAN | 49.715 % | 544 | 0 |
| TERA_HUMAN | 84.511 % | 1345 | 0 |
| NVL_HUMAN | 41.318 % | 464 | 2.11E-151 |