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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S5...' > 
  2. Transcript 'Cisavi.CG.ENS81.R48....'

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R48.1063760-1068304.16677.t

Possible name(s)

TIMP2; TIMP3; TIMP4

Gene model

Cisavi.CG.ENS81.R48.1063760-1068304

Location

R48 [1,063,759 / 1,068,304]

Sequences

Amino acid sequence

Length: 506

>Cisavi.CG.ENS81.R48.1063760-1068304.16677.p
MKLAVVFTCLLAAVVLNQHATDACSCAPEHPQPMYCRSDYVVKVFVASKKDVVIEEDGSI
TELEDEDEENELPDGVVTILPERDVGEEDAEEASLPAPVHGEQPDADVEETGTDAASEET
GAAEVEVNGADVEGGEAGADAEEAINGEVVEEAGADVEEGVDVASEQPTEEAEASEAPED
GREIKWPHITTSSKQRVPVIESAVSDPSGSSEESAVIVPELVDVENATVVDSEVVNDVTT
DDVSANEATADVAVERVPRNTYMYLGPNGVMPGDKARFAGIRGKPLGLTSRDAAPGVASQ
NELFTDENRFKRNAPPGAFPPALIVPDNRRPHRRFPSRHFNGLVNVHTQYKVNVLKVFKG
EMMTNETTYIYTPPSSSLCRMSLHTRAPYVLMGRIRDGRMHVTYCDFKLDVSELTNSELR
HLTSTFKHRFNKACNDCHIHVCSFNGCPEKSKNSNQCNWRNMYTLQHKKANEFACVHKKS
GECDWYNALHPDMTPADLDDDDVDSP

Nucleotide sequence

Length: 1,697

>Cisavi.CG.ENS81.R48.1063760-1068304.16677.t
ATGAAGTTAGCCGTAGTATTTACCTGCCTTCTGGCTGCCGTCGTTTTAAATCAACACGCA
ACGGACGCCTGTTCATGCGCGCCGGAGCACCCACAGCCCATGTATTGCAGATCGGATTAC
GTTGTGAAAGTGTTCGTGGCGAGCAAGAAAGATGTCGTGATCGAAGAAGATGGATCCATT
ACCGAGTTGGAGGATGAAGACGAGGAAAATGAACTTCCGGATGGTGTGGTCACTATTCTT
CCGGAACGGGATGTTGGGGAGGAGGATGCTGAAGAAGCGTCACTTCCGGCTCCGGTGCAC
GGGGAGCAGCCTGACGCGGATGTGGAGGAAACTGGCACAGACGCTGCGAGCGAAGAGACC
GGCGCTGCGGAAGTTGAAGTTAATGGCGCGGATGTGGAGGGAGGAGAAGCAGGTGCGGAT
GCAGAGGAAGCAATAAATGGCGAGGTTGTAGAAGAGGCCGGCGCGGATGTAGAGGAAGGT
GTGGATGTCGCGTCGGAACAACCGACGGAAGAGGCGGAAGCATCGGAGGCTCCGGAGGAC
GGACGTGAGATCAAATGGCCGCACATCACAACAAGCAGCAAGCAACGAGTTCCAGTGATT
GAATCCGCCGTTTCGGATCCGTCAGGTAGCAGCGAAGAGTCAGCGGTTATCGTACCGGAA
CTGGTCGACGTTGAAAACGCAACAGTTGTCGATTCTGAAGTAGTGAATGACGTCACTACT
GATGACGTATCAGCCAATGAAGCTACGGCGGACGTAGCAGTGGAACGGGTGCCAAGGAAC
ACATATATGTATTTAGGGCCAAATGGAGTTATGCCCGGAGATAAGGCAAGATTTGCGGGA
ATTCGAGGCAAACCTCTCGGGTTGACGTCACGTGACGCCGCGCCTGGAGTTGCGTCACAA
AACGAACTTTTCACAGACGAAAACAGATTTAAGAGAAATGCCCCACCGGGTGCTTTCCCG
CCAGCACTAATTGTTCCAGACAATCGCCGACCTCACAGACGGTTTCCCAGCAGACATTTC
AACGGCCTTGTTAACGTGCATACGCAATACAAAGTTAATGTACTCAAGGTCTTCAAAGGA
GAAATGATGACGAATGAAACGACTTACATCTATACCCCGCCTTCAAGTTCTCTTTGCCGC
ATGTCGTTACACACTAGAGCTCCGTATGTGCTTATGGGCAGGATAAGAGATGGAAGAATG
CACGTGACTTACTGCGATTTTAAGCTCGACGTATCGGAACTCACCAACTCTGAATTGCGC
CACCTAACGAGCACGTTCAAACACAGATTTAACAAAGCGTGCAACGATTGCCATATACAC
GTCTGTAGCTTCAATGGTTGCCCGGAAAAATCCAAGAACTCCAACCAATGCAATTGGAGG
AACATGTACACACTACAGCACAAGAAAGCGAACGAGTTCGCGTGCGTCCACAAGAAGTCG
GGAGAATGCGACTGGTACAACGCCTTGCACCCAGATATGACACCGGCAGATCTGGACGAT
GATGACGTAGATTCGCCATGAGTCAGCCCAATTCGTTTTAGACTTTTCGTTTTGAAATAT
TTCCCGCTGTTCCGCATTTTATAAAACGGCCCCCAAATTGAATTTAGTAAGAAAAATAGC
ATTTTTAGTGATAAAAAGTTAATAGCATCGGTCGTGTCATGTATATGTGTATGAGCTTGT
GATTTTATTGAAAATAT

InterProScan

PANTHER
TIMP (IPR001820) - T[3-488] 1.6E-50
Pfam
TIMP (IPR001820) - T[22-57] 7.4E-8 - T[346-485] 8.5E-23
SUPERFAMILY
TIMP-like_OB-fold (IPR008993) - T[24-58] 1.61E-6 - T[344-487] 9.61E-29
SMART
TIMP (IPR001820) - T[336-485] 1.7E-9
Gene3D
TIMP_C (IPR027465) - T[414-490] 8.0E-9

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TIMP2_HUMAN 31.126 % 80.9 2.42E-17
TIMP3_HUMAN 30.822 % 78.6 9.92E-17