Aniseed - Transcript Card

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R474.25170-30094.18080.t

Possible name(s)

IDH3A; IDH3B; IDH3G

Gene model

Cisavi.CG.ENS81.R474.25170-30094

Location

R474 [25,169 / 30,094]

Sequences

Amino acid sequence

Length: 386

>Cisavi.CG.ENS81.R474.25170-30094.18080.p
MSTLRGLTRLLSKAIVNPSNGHSTTTPRCLHTAYQKFAEKSPEAKQEGEKLRVTMIPGDG
VGPELMHAVKEVLKAADVPIQFEEFWVSEVQDRCSEAQISELIQSVNKNKVAIKGILATP
SWFDIGELQSVNMNIRKQLDLFANVVRVKSLPGVKTRHGEIDIVVIREQTEGEYSALEHE
SAPGVVESLKIITRTKSERIAKFAFDYATKHGRNKVTAVHKANIMKLADGMFLDSCRQVS
KLYPKIKFEAMIVDNTCMQLASHPSQFDVMVMPNLYGNIIDNLAAGLVGGAGVVPGESYS
PDCVVFETGARHPFAQAVGRNIANPTAMLMCAFNMLSHMNLVAHAKLVQDSLLKVLRDGK
IRTTDLRGYATTTEFTAAVIANLGRA

Nucleotide sequence

Length: 1,312

>Cisavi.CG.ENS81.R474.25170-30094.18080.t
GTTGTGGTAAGTGGGAAGACAGAGAAAATATTCCACAGTAGAAGATGAGTACTCTACGAG
GATTGACTCGTCTGCTATCCAAGGCTATAGTGAACCCCTCCAATGGACATTCCACCACGA
CCCCAAGATGCTTGCACACAGCGTATCAGAAGTTCGCTGAGAAGTCACCAGAGGCCAAGC
AGGAGGGGGAGAAGTTGCGGGTCACCATGATACCTGGGGATGGGGTGGGGCCGGAGCTCA
TGCACGCTGTCAAGGAGGTGTTGAAAGCTGCCGATGTCCCGATTCAGTTCGAGGAGTTCT
GGGTGAGCGAGGTGCAGGACCGATGCTCTGAAGCTCAGATCAGCGAACTCATACAATCGG
TCAACAAGAATAAAGTTGCCATTAAAGGTATATTGGCCACTCCATCCTGGTTTGATATTG
GGGAGCTGCAATCTGTCAATATGAACATCAGGAAACAACTTGATTTATTCGCGAATGTGG
TCCGCGTGAAGAGCTTGCCGGGCGTGAAGACCCGACATGGGGAGATCGATATCGTGGTCA
TCCGGGAGCAGACGGAGGGGGAGTACAGCGCATTGGAGCACGAGAGCGCCCCTGGTGTGG
TGGAGTCGCTGAAGATTATAACTCGAACCAAGTCGGAACGGATTGCAAAGTTCGCGTTCG
ATTACGCAACCAAACATGGTCGAAACAAAGTCACCGCAGTGCATAAAGCCAACATAATGA
AACTCGCAGACGGTATGTTCCTCGATTCATGCCGACAAGTCTCCAAGCTTTACCCCAAGA
TCAAGTTTGAAGCCATGATTGTGGATAACACATGCATGCAGCTTGCCTCCCACCCGTCCC
AGTTCGACGTGATGGTGATGCCCAACTTATACGGGAACATCATCGACAACCTGGCAGCCG
GTCTTGTAGGTGGGGCTGGGGTGGTTCCCGGGGAAAGCTACAGCCCCGATTGCGTGGTCT
TCGAAACTGGAGCTCGCCATCCATTCGCGCAAGCTGTGGGTCGTAACATCGCCAACCCAA
CCGCCATGCTCATGTGTGCGTTCAATATGCTCAGCCATATGAACTTGGTGGCGCACGCGA
AGCTCGTCCAGGATTCATTGCTGAAGGTGCTTCGTGATGGAAAGATTCGAACCACCGATC
TGAGGGGATACGCTACCACCACCGAGTTCACGGCCGCGGTGATCGCCAACCTTGGACGCG
CATAACCCCCCACAACCCCCCCCCCTTTCACCACACCCTCTATTTATTTAGTTCCACTCA
TGCTGCTGTCCCAATATATTCCCGTTGGTTCAAATACATTTTGTTTTTCAAA

InterProScan

TIGRFAM	Isocitrate_DH_NAD (IPR004434) - T[48-383] 1.4E-148
SMART	IsoPropMal-DH-like_dom (IPR024084) - T[52-379] 3.5E-146
Pfam	IsoPropMal-DH-like_dom (IPR024084) - T[53-379] 3.2E-73
ProSitePatterns	IsoCit/isopropylmalate_DH_CS (IPR019818) - T[274-293] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
IDH3G_HUMAN	51.549 %	346	2.39E-117
IDH3B_HUMAN	61.88 %	469	6.27E-166
IDH3A_HUMAN	45.427 %	288	6.33E-95