- Clone 'ciad072m24' >
- Clone 'cien111244' >
- Clone 'cign031d06' >
- Clone 'cieg026n19' >
- Transcript 'Cisavi.CG.ENS81.R458...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R458.71919-83441.03372.t
Possible name(s)
HERC2; RCBTB1; RCBTB2
Gene model
Location
R458 [72,063 / 83,398]
Amino acid sequence
Length: 537
>Cisavi.CG.ENS81.R458.71919-83441.03372.p
MWPFLSLLPADMLGKINLVYVFGQSATEVLFTTVDEQVYSLGTNSSGCLGVGDNQSSLEP
RCIEMFNGLKIASIVAGSGPHVLLLTQDGEIYTWGHNSYMQLGNGGTAPGVQPSLLSRHI
NHRVVQVSCGSHHSMVLTAEGEVYTWGYNNCGQIGSGSTANQGSPRKVTACIGSKRISDI
SCGQTTSIAVTDSGEVYSWGYNGNGQLGVGNNVNQTNPCRIAALQGVVVTQVVCGYAHAL
ALTDNGSVFGWGANSYGQLGSGNKANTVTPLQVATNIGRVTTIAATHYSHSSAARNQHGH
IYMWGQLRQQATPDPRLTNFHNLNAVFTGFSSPPVTWIMISISIRLSLIASVAGCSEVEP
SVQQSVSRAFNDENSADLRILVEGKYIHVHKSILKIRCDYFKRMFQSHWDENDQDVIEIN
GYSYAVVYSFVYWLYTDHVELPAEDTIGLLDLATSYCEEGLKRQCQKLIKESIAEDNVAL
VYAAAIKYSAKELQDFCFQFCLNHLTRVVQTDSFKLLDKEIMYKLVCEAAKNGAFKR
Nucleotide sequence
Length: 1,821
>Cisavi.CG.ENS81.R458.71919-83441.03372.t
ATGTGGCCGTTCCTGTCCCTCCTTCCCGCTGATATGCTCGGTAAAATTAATCTGGTGTAC
GTGTTCGGGCAATCTGCGACTGAAGTTTTGTTCACCACAGTGGACGAGCAGGTTTACAGC
TTGGGAACAAACAGCAGCGGTTGTCTTGGTGTTGGGGACAATCAGTCTTCGTTGGAACCG
CGTTGCATTGAGATGTTTAATGGGTTGAAAATTGCATCAATCGTAGCTGGAAGTGGACCC
CATGTTTTGCTATTGACCCAAGATGGTGAAATCTACACGTGGGGTCACAACAGCTACATG
CAGCTGGGTAACGGGGGTACTGCCCCCGGTGTCCAACCCTCCCTTCTATCTCGGCATATC
AACCACAGGGTGGTGCAAGTGTCGTGCGGGAGCCACCACTCGATGGTGCTAACTGCCGAG
GGGGAGGTTTATACATGGGGGTATAACAACTGTGGGCAGATTGGTTCTGGTTCCACTGCA
AACCAAGGTTCCCCTCGGAAAGTTACCGCTTGCATCGGTAGCAAGCGGATAAGCGATATC
AGCTGTGGACAGACCACCTCGATTGCGGTAACAGACAGTGGGGAGGTATATTCATGGGGG
TACAATGGTAACGGACAACTTGGTGTGGGGAACAATGTCAACCAGACCAACCCTTGTCGT
ATCGCTGCGCTACAGGGTGTAGTGGTTACACAGGTGGTGTGTGGTTACGCTCATGCACTC
GCGCTCACGGACAACGGGTCGGTATTCGGGTGGGGAGCTAACAGCTACGGACAATTGGGA
TCAGGGAACAAAGCTAACACTGTGACCCCACTTCAGGTAGCAACGAACATAGGAAGGGTA
ACCACCATCGCCGCAACCCATTATTCCCATTCATCTGCTGCCCGTAATCAACATGGCCAC
ATATACATGTGGGGGCAGTTGAGACAACAAGCAACACCCGACCCAAGGCTCACCAACTTC
CACAATCTCAACGCCGTTTTCACCGGGTTTAGTTCCCCTCCAGTGACATGGATCATGATT
AGCATTTCCATTAGATTATCATTAATTGCTTCTGTGGCAGGATGCAGTGAAGTGGAACCA
TCTGTGCAGCAGAGCGTATCGCGTGCGTTCAACGACGAAAACTCAGCGGATTTAAGAATT
TTAGTCGAAGGGAAATATATCCACGTGCACAAGTCAATTCTCAAGATAAGATGCGATTAC
TTCAAACGTATGTTTCAATCCCACTGGGATGAAAATGACCAGGACGTTATTGAGATCAAC
GGATATAGTTACGCTGTGGTATATTCCTTTGTGTATTGGCTCTACACTGACCATGTTGAA
CTACCTGCTGAAGATACAATTGGCTTGCTGGACCTCGCCACATCGTACTGTGAAGAAGGG
TTGAAACGACAATGTCAGAAGTTGATCAAGGAGAGCATAGCGGAGGACAACGTGGCACTG
GTGTATGCGGCCGCCATTAAGTACAGCGCTAAAGAACTTCAAGATTTCTGCTTCCAATTC
TGCCTGAATCACCTAACACGAGTGGTCCAGACTGACAGTTTCAAACTACTGGACAAAGAG
ATAATGTACAAGCTAGTGTGTGAGGCCGCGAAAAACGGAGCCTTTAAGCGTTGATATATT
TAATTTATTTTATCGCTTTTATCACCTGCAGTGTTAATCGCTTTTATCGCTTTTAGGTTG
ATGATATTTTAGTTGTTACGTCACTGTGTGCATTGTAGCTTGGCATGCGTCACTCCTATT
GGTTCCCCGGCTTACTGGTCGGAAATTGTGTTCTGTAGCTCGTTTTAACCACTCTATTTA
TCCTGTTGTTGGAACTTAGTG
| Gene3D |
RCC1/BLIP-II (IPR009091) - T[6-339] 6.0E-83 |
| SUPERFAMILY |
RCC1/BLIP-II (IPR009091) - T[19-308] 2.44E-78 |
| ProSiteProfiles |
Reg_chr_condens (IPR000408) - T[36-88] 11.328 - T[89-140] 16.273 - T[141-193] 14.464 - T[194-245] 17.097 - T[246-296] 10.886 |
| Pfam |
Reg_chr_condens (IPR000408) - T[36-78] 5.0E-8 - T[193-242] 2.9E-14 - T[245-286] 1.5E-8 |
| PRINTS |
Reg_chr_condens (IPR000408) - T[90-106] 3.9E-14 - T[124-137] 3.9E-14 - T[143-159] 3.9E-14 - T[194-210] 3.9E-14 - T[232-248] 3.9E-14 - T[248-262] 3.9E-14 |
| ProSitePatterns |
Reg_chr_condens (IPR000408) - T[127-137] . |
| SUPERFAMILY |
SKP1/BTB/POZ_sf (IPR011333) - T[360-471] 2.3E-24 |
| Pfam |
BTB/POZ_dom (IPR000210) - T[370-472] 5.4E-19 |
| ProSiteProfiles |
BTB/POZ_dom (IPR000210) - T[376-443] 16.611 |
| SMART |
BTB/POZ_dom (IPR000210) - T[376-473] 2.1E-20 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HERC2_HUMAN | 35.379 % | 159 | 2.54E-41 |
| RCBT2_HUMAN | 49.44 % | 567 | 0 |
| RCBT1_HUMAN | 51.866 % | 595 | 0 |