- Transcript 'Boschl.CG.Botznik201...' >
- Clone 'cien46927' >
- Transcript 'Cisavi.CG.ENS81.R458...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R458.71919-83441.03371.t
Possible name(s)
HERC2; RCBTB1; RCBTB2
Gene model
Location
R458 [71,918 / 83,441]
Amino acid sequence
Length: 556
>Cisavi.CG.ENS81.R458.71919-83441.03371.p
MDGNSKPHNTTSNVDRTGPILGYLKNIESSDMWPFLSLLPADMLGKINLVYVFGQSATEV
LFTTVDEQVYSLGTNSSGCLGVGDNQSSLEPRCIEMFNGLKIASIVAGSGPHVLLLTQDG
EIYTWGHNSYMQLGNGGTAPGVQPSLLSRHINHRVVQVSCGSHHSMVLTAEGEVYTWGYN
NCGQIGSGSTANQGSPRKVTACIGSKRISDISCGQTTSIAVTDSGEVYSWGYNGNGQLGV
GNNVNQTNPCRIAALQGVVVTQVVCGYAHALALTDNGSVFGWGANSYGQLGSGNKANTVT
PLQVATNIGRVTTIAATHYSHSSAARNQHGHIYMWGQLRQQATPDPRLTNFHNLNAVFTG
FSSPPVCWTAVAGCSEVEPSVQQSVSRAFNDENSADLRILVEGKYIHVHKSILKIRCDYF
KRMFQSHWDENDQDVIEINGYSYAVVYSFVYWLYTDHVELPAEDTIGLLDLATSYCEEGL
KRQCQKLIKESIAEDNVALVYAAAIKYSAKELQDFCFQFCLNHLTRVVQTDSFKLLDKEI
MYKLVCEAAKNGAFKR
Nucleotide sequence
Length: 1,973
>Cisavi.CG.ENS81.R458.71919-83441.03371.t
AGCACAGATGATAAACCTTGTACTTAGTAATGTTCGGTAGTGACGCGTCTGTATGGATGG
TAATAGTAAACCCCACAACACCACTAGTAATGTGGACAGGACAGGTCCAATATTGGGATA
TTTGAAGAACATCGAATCTTCAGACATGTGGCCGTTCCTGTCCCTCCTTCCCGCTGATAT
GCTCGGTAAAATTAATCTGGTGTACGTGTTCGGGCAATCTGCGACTGAAGTTTTGTTCAC
CACAGTGGACGAGCAGGTTTACAGCTTGGGAACAAACAGCAGCGGTTGTCTTGGTGTTGG
GGACAATCAGTCTTCGTTGGAACCGCGTTGCATTGAGATGTTTAATGGGTTGAAAATTGC
ATCAATCGTAGCTGGAAGTGGACCCCATGTTTTGCTATTGACCCAAGATGGTGAAATCTA
CACGTGGGGTCACAACAGCTACATGCAGCTGGGTAACGGGGGTACTGCCCCCGGTGTCCA
ACCCTCCCTTCTATCTCGGCATATCAACCACAGGGTGGTGCAAGTGTCGTGCGGGAGCCA
CCACTCGATGGTGCTAACTGCCGAGGGGGAGGTTTATACATGGGGGTATAACAACTGTGG
GCAGATTGGTTCTGGTTCCACTGCAAACCAAGGTTCCCCTCGGAAAGTTACCGCTTGCAT
CGGTAGCAAGCGGATAAGCGATATCAGCTGTGGACAGACCACCTCGATTGCGGTAACAGA
CAGTGGGGAGGTATATTCATGGGGGTACAATGGTAACGGACAACTTGGTGTGGGGAACAA
TGTCAACCAGACCAACCCTTGTCGTATCGCTGCGCTACAGGGTGTAGTGGTTACACAGGT
GGTGTGTGGTTACGCTCATGCACTCGCGCTCACGGACAACGGGTCGGTATTCGGGTGGGG
AGCTAACAGCTACGGACAATTGGGATCAGGGAACAAAGCTAACACTGTGACCCCACTTCA
GGTAGCAACGAACATAGGAAGGGTAACCACCATCGCCGCAACCCATTATTCCCATTCATC
TGCTGCCCGTAATCAACATGGCCACATATACATGTGGGGGCAGTTGAGACAACAAGCAAC
ACCCGACCCAAGGCTCACCAACTTCCACAATCTCAACGCCGTTTTCACCGGGTTTAGTTC
CCCTCCAGTTTGTTGGACAGCTGTGGCAGGATGCAGTGAAGTGGAACCATCTGTGCAGCA
GAGCGTATCGCGTGCGTTCAACGACGAAAACTCAGCGGATTTAAGAATTTTAGTCGAAGG
GAAATATATCCACGTGCACAAGTCAATTCTCAAGATAAGATGCGATTACTTCAAACGTAT
GTTTCAATCCCACTGGGATGAAAATGACCAGGACGTTATTGAGATCAACGGATATAGTTA
CGCTGTGGTATATTCCTTTGTGTATTGGCTCTACACTGACCATGTTGAACTACCTGCTGA
AGATACAATTGGCTTGCTGGACCTCGCCACATCGTACTGTGAAGAAGGGTTGAAACGACA
ATGTCAGAAGTTGATCAAGGAGAGCATAGCGGAGGACAACGTGGCACTGGTGTATGCGGC
CGCCATTAAGTACAGCGCTAAAGAACTTCAAGATTTCTGCTTCCAATTCTGCCTGAATCA
CCTAACACGAGTGGTCCAGACTGACAGTTTCAAACTACTGGACAAAGAGATAATGTACAA
GCTAGTGTGTGAGGCCGCGAAAAACGGAGCCTTTAAGCGTTGATATATTTAATTTATTTT
ATCGCTTTTATCACCTGCAGTGTTAATCGCTTTTATCGCTTTTAGGTTGATGATATTTTA
GTTGTTACGTCACTGTGTGCATTGTAGCTTGGCATGCGTCACTCCTATTGGTTCCCCGGC
TTACTGGTCGGAAATTGTGTTCTGTAGCTCGTTTTAACCACTCTATTTATCCTGTTGTTG
GAACTTAGTGATTCGATGTTGATCTGCTATTTGTTCCCAATCGATGACGACAT
| Gene3D |
RCC1/BLIP-II (IPR009091) - T[27-363] 3.6E-83 |
| SUPERFAMILY |
RCC1/BLIP-II (IPR009091) - T[50-338] 1.13E-77 |
| ProSiteProfiles |
Reg_chr_condens (IPR000408) - T[67-119] 11.328 - T[120-171] 16.273 - T[172-224] 14.464 - T[225-276] 17.097 - T[277-327] 10.886 |
| Pfam |
Reg_chr_condens (IPR000408) - T[67-109] 5.3E-8 - T[224-273] 3.1E-14 - T[276-317] 1.5E-8 |
| PRINTS |
Reg_chr_condens (IPR000408) - T[121-137] 4.6E-14 - T[155-168] 4.6E-14 - T[174-190] 4.6E-14 - T[225-241] 4.6E-14 - T[263-279] 4.6E-14 - T[279-293] 4.6E-14 |
| ProSitePatterns |
Reg_chr_condens (IPR000408) - T[158-168] . |
| SUPERFAMILY |
SKP1/BTB/POZ_sf (IPR011333) - T[379-490] 2.46E-24 |
| Pfam |
BTB/POZ_dom (IPR000210) - T[389-491] 5.7E-19 |
| SMART |
BTB/POZ_dom (IPR000210) - T[395-492] 2.1E-20 |
| ProSiteProfiles |
BTB/POZ_dom (IPR000210) - T[395-462] 16.611 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HERC2_HUMAN | 35.379 % | 159 | 4.01E-41 |
| RCBT2_HUMAN | 49.088 % | 569 | 0 |
| RCBT1_HUMAN | 52.863 % | 595 | 0 |