- Clone 'cicl056o12' >
- Transcript 'Cisavi.CG.ENS81.R451...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R451.139947-147158.00034.t
Possible name(s)
NTN1; NTN3; NTN5
Gene model
Location
R451 [140,142 / 146,743]
Amino acid sequence
Length: 563
>Cisavi.CG.ENS81.R451.139947-147158.00034.p
CYDRNKNPQECNPEFENIAHKKRVVVTETCGVDGRDPFCKLVEENGVVSRVCDVCERTGR
RSHPARYLTDINDIGNLTYWQSKTFQPGEDSDREVELTISFGKEYELSYLYMEFASPRPA
AMVIYKSMNHGKTWVPYQHYAKNCRRRFNMAFRTEVNRTNEQEVLCSENFSEVYPYSRGI
IVFNPRDGRPSDEDFDNSYILQEWVTATDVKIVLGTTPTTYSFGSSSYYAINDISIGGIC
KCNGHAERCLMKKGKMVCDCKHKTTGPNCDMCKAFHMDRPPQRATKTDANECIACNCNMH
AKRCRFNHDLFEKSGRISGGVCVKCRHNTDGRYCHFCKAGYYRNNKTKSISDKRTCKLCD
CNRVGSLGKHCDRDTGQCVCKEHVTRRKCNFCAKGYKQTGSIVAPCAKSSLTGRLTYAKR
KQNSSAAANSTISCPRRCSSARGVRVSLGKFCRMGYAVVVQVTGKLTLRRKTRFTLQLHK
TYKRGVVRFRKKERVDVEVRDRIVHCLCPKLQVKKTYLLIGKYNRSGGEPRLAIDKGTIV
MEWKNKYKRRLRSLQRRARRRKC
Nucleotide sequence
Length: 1,692
>Cisavi.CG.ENS81.R451.139947-147158.00034.t
TGTTATGATAGGAACAAAAATCCACAAGAATGTAACCCGGAGTTCGAGAATATAGCTCAT
AAGAAACGTGTGGTGGTAACAGAGACGTGTGGGGTGGATGGAAGAGACCCGTTCTGTAAG
CTTGTCGAGGAAAATGGCGTCGTTTCTAGAGTTTGTGACGTATGTGAACGAACTGGTCGC
AGGTCGCACCCGGCGCGATACTTGACTGACATCAACGACATAGGGAACCTGACTTACTGG
CAATCCAAGACGTTTCAACCTGGTGAAGATAGCGACCGCGAGGTTGAACTAACAATTTCA
TTCGGGAAGGAATACGAGTTGTCGTATCTCTACATGGAGTTCGCGTCGCCCCGGCCCGCA
GCCATGGTCATATACAAGTCGATGAACCACGGAAAGACGTGGGTTCCGTACCAACATTAC
GCCAAGAACTGTCGCCGGAGATTTAACATGGCGTTCAGAACAGAAGTGAACAGGACAAAC
GAACAAGAAGTTTTATGTTCGGAGAACTTCAGTGAGGTTTACCCGTATAGTCGGGGTATA
ATTGTGTTTAACCCGAGGGACGGGCGACCATCAGATGAAGACTTCGACAACAGTTACATC
CTCCAAGAATGGGTGACTGCCACCGATGTCAAAATCGTTCTCGGAACCACCCCAACCACC
TACAGCTTCGGTTCCAGCTCGTATTACGCAATCAATGACATCAGCATCGGCGGGATATGT
AAATGCAACGGCCACGCTGAGAGGTGTTTGATGAAGAAGGGGAAAATGGTGTGCGACTGC
AAGCACAAGACCACGGGGCCGAACTGCGATATGTGCAAGGCATTCCACATGGATCGGCCA
CCACAGCGAGCCACTAAGACCGACGCCAACGAATGCATTGCTTGCAATTGCAACATGCAC
GCGAAGAGATGTCGGTTCAACCACGATTTGTTCGAGAAATCTGGCAGGATAAGCGGAGGG
GTGTGTGTGAAGTGTCGGCATAACACTGATGGACGGTACTGTCACTTCTGCAAGGCTGGA
TATTATAGAAATAACAAAACCAAGTCGATCTCGGATAAACGGACTTGCAAACTTTGCGAT
TGCAATCGCGTCGGGTCCTTGGGCAAGCATTGCGACCGAGACACGGGTCAGTGCGTTTGC
AAGGAACACGTGACAAGAAGGAAATGTAACTTCTGCGCGAAAGGCTACAAGCAGACCGGC
TCCATCGTGGCCCCATGCGCCAAATCAAGTCTAACAGGACGCTTAACATATGCGAAGCGA
AAACAAAACTCGTCGGCTGCCGCGAATTCCACCATTTCTTGCCCGCGGAGATGCAGCAGT
GCCCGGGGGGTGAGGGTTTCGCTCGGGAAGTTCTGCAGGATGGGATACGCTGTCGTCGTG
CAGGTGACGGGGAAACTCACGCTGAGGAGGAAAACCCGCTTCACCCTCCAACTCCACAAG
ACGTACAAACGAGGCGTCGTTCGCTTCCGGAAGAAGGAGCGAGTCGACGTGGAAGTCCGG
GATCGAATCGTCCATTGTTTGTGTCCCAAGCTGCAGGTGAAGAAGACTTACCTCCTCATC
GGGAAGTACAACCGATCCGGCGGCGAACCGCGGCTGGCCATCGACAAAGGCACCATTGTG
ATGGAATGGAAGAACAAATACAAGCGGAGATTGCGGAGTTTGCAACGAAGGGCGCGGAGG
CGCAAGTGCTGA
| Gene3D |
Laminin_N_sf (IPR038684) - T[1-260] 1.1E-85 |
| SMART |
Laminin_N (IPR008211) - T[5-238] 4.4E-74 |
| ProSiteProfiles |
Laminin_N (IPR008211) - T[7-239] 48.819 |
| Pfam |
Laminin_N (IPR008211) - T[11-238] 2.7E-67 |
| SUPERFAMILY |
Galactose-bd-like_sf (IPR008979) - T[62-140] 3.74E-5 |
| Pfam |
Laminin_EGF (IPR002049) - T[240-281] 6.9E-6 - T[295-351] 2.7E-7 - T[359-399] 2.7E-8 |
| ProSiteProfiles |
Laminin_EGF (IPR002049) - T[240-294] 9.741 - T[295-358] 7.684 - T[359-408] 17.7 |
| SMART |
Laminin_EGF (IPR002049) - T[240-292] 2.4E-5 - T[295-356] 9.6E-7 - T[359-406] 8.9E-10 |
| ProSitePatterns |
Laminin_EGF (IPR002049) - T[322-356] . |
| SUPERFAMILY |
TIMP-like_OB-fold (IPR008993) - T[433-563] 2.55E-25 |
| ProSiteProfiles |
Netrin_domain (IPR001134) - T[434-563] 21.582 |
| SMART |
Netrin_module_non-TIMP (IPR018933) - T[448-557] 2.9E-16 |
| Pfam |
Netrin_module_non-TIMP (IPR018933) - T[450-556] 1.0E-19 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| LAMC1_HUMAN | 38.049 % | 290 | 2.08E-85 |
| NET1_HUMAN | 42.142 % | 491 | 9.87E-169 |
| NET3_HUMAN | 35.702 % | 351 | 1.72E-114 |