- Transcript 'Cisavi.CG.ENS81.R451...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R451.139947-147158.00030.t
Possible name(s)
NTN1; NTN3; NTN5
Gene model
Location
R451 [139,946 / 147,158]
Amino acid sequence
Length: 670
>Cisavi.CG.ENS81.R451.139947-147158.00030.p
MGGGKVYVGENKTRIWNLMMALLVVAFIPSTNQLRPPVLSRCYDRNKNPQECNPEFENIA
HKKRVVVTETCGVDGRDPFCKLVEENGVVSRVCDVCERTGRRSHPARYLTDINDIGNLTY
WQSKTFQPGEDSDREVELTISFGKEYELSYLYMEFASPRPAAMVIYKSMNHGKTWVPYQH
YAKNCRRRFNMAFRTEVNRTNEQEVLCSENFSEVYPYSRGIIVFNPRDGRPSDEDFDNSY
ILQEWVTATDVKIVLSGLNDIPRNPSAVARIASREGRSALAGGGRRRMTSPGAWGIPRMT
RGGRAVATRASTTALYHAGTRVSGATEVVATNSGTTPTTYSFGSSSYYAINDISIGGICK
CNGHAERCLMKKGKMVCDCKHKTTGPNCDMCKAFHMDRPPQRATKTDANECIACNCNMHA
KRCRFNHDLFEKSGRISGGVCVKCRHNTDGRYCHFCKAGYYRNNKTKSISDKRTCKLCDC
NRVGSLGKHCDRDTGQCVCKEHVTRRKCNFCAKGYKQTGSIVAPCARIPVASTPPKGNPS
CPRRCSSARGVRVSLGKFCRMGYAVVVQVTGKLTLRRKTRFTLQLHKTYKRGVVRFRKKE
RVDVEVRDRIVHCLCPKLQVKKTYLLIGKYNRSGGEPRLAIDKGTIVMEWKNKYKRRLRS
LQRRARRRKC
Nucleotide sequence
Length: 2,501
>Cisavi.CG.ENS81.R451.139947-147158.00030.t
ACGAGTTGTGAATTAGGAATGTTTTAAAGTAGCGAATTCCACTGTTGCAGTTGCTATTAT
CATTATTGGAAATATGGGGGGCGGGAAAGTATATGTCGGAGAAAATAAAACTAGAATTTG
GAACTTGATGATGGCGCTTCTAGTGGTCGCGTTTATTCCATCGACGAATCAACTGAGACC
ACCGGTGCTGAGTCGATGTTATGATAGGAACAAAAATCCACAAGAATGTAACCCGGAGTT
CGAGAATATAGCTCATAAGAAACGTGTGGTGGTAACAGAGACGTGTGGGGTGGATGGAAG
AGACCCGTTCTGTAAGCTTGTCGAGGAAAATGGCGTCGTTTCTAGAGTTTGTGACGTATG
TGAACGAACTGGTCGCAGGTCGCACCCGGCGCGATACTTGACTGACATCAACGACATAGG
GAACCTGACTTACTGGCAATCCAAGACGTTTCAACCTGGTGAAGATAGCGACCGCGAGGT
TGAACTAACAATTTCATTCGGGAAGGAATACGAGTTGTCGTATCTCTACATGGAGTTCGC
GTCGCCCCGGCCCGCAGCCATGGTCATATACAAGTCGATGAACCACGGAAAGACGTGGGT
TCCGTACCAACATTACGCCAAGAACTGTCGCCGGAGATTTAACATGGCGTTCAGAACAGA
AGTGAACAGGACAAACGAACAAGAAGTTTTATGTTCGGAGAACTTCAGTGAGGTTTACCC
GTATAGTCGGGGTATAATTGTGTTTAACCCGAGGGACGGGCGACCATCAGATGAAGACTT
CGACAACAGTTACATCCTCCAAGAATGGGTGACTGCCACCGATGTCAAAATCGTTCTGTC
CGGGTTGAATGACATCCCGCGTAATCCATCCGCTGTAGCAAGGATCGCTTCCAGGGAAGG
AAGATCAGCATTGGCCGGTGGTGGCAGACGACGTATGACGTCACCAGGTGCTTGGGGGAT
TCCCCGCATGACGCGCGGTGGGAGAGCAGTTGCAACAAGAGCAAGCACGACGGCTCTGTA
CCACGCTGGAACCCGAGTGTCGGGCGCGACCGAGGTGGTTGCAACCAACAGCGGAACCAC
CCCAACCACCTACAGCTTCGGTTCCAGCTCGTATTACGCAATCAATGACATCAGCATCGG
CGGGATATGTAAATGCAACGGCCACGCTGAGAGGTGTTTGATGAAGAAGGGGAAAATGGT
GTGCGACTGCAAGCACAAGACCACGGGGCCGAACTGCGATATGTGCAAGGCATTCCACAT
GGATCGGCCACCACAGCGAGCCACTAAGACCGACGCCAACGAATGCATTGCTTGCAATTG
CAACATGCACGCGAAGAGATGTCGGTTCAACCACGATTTGTTCGAGAAATCTGGCAGGAT
AAGCGGAGGGGTGTGTGTGAAGTGTCGGCATAACACTGATGGACGGTACTGTCACTTCTG
CAAGGCTGGATATTATAGAAATAACAAAACCAAGTCGATCTCGGATAAACGGACTTGCAA
ACTTTGCGATTGCAATCGCGTCGGGTCCTTGGGCAAGCATTGCGACCGAGACACGGGTCA
GTGCGTTTGCAAGGAACACGTGACAAGAAGGAAATGTAACTTCTGCGCGAAAGGCTACAA
GCAGACCGGCTCCATCGTGGCCCCATGCGCCAGAATACCAGTTGCCTCAACACCGCCCAA
GGGAAATCCATCTTGCCCGCGGAGATGCAGCAGTGCCCGGGGGGTGAGGGTTTCGCTCGG
GAAGTTCTGCAGGATGGGATACGCTGTCGTCGTGCAGGTGACGGGGAAACTCACGCTGAG
GAGGAAAACCCGCTTCACCCTCCAACTCCACAAGACGTACAAACGAGGCGTCGTTCGCTT
CCGGAAGAAGGAGCGAGTCGACGTGGAAGTCCGGGATCGAATCGTCCATTGTTTGTGTCC
CAAGCTGCAGGTGAAGAAGACTTACCTCCTCATCGGGAAGTACAACCGATCCGGCGGCGA
ACCGCGGCTGGCCATCGACAAAGGCACCATTGTGATGGAATGGAAGAACAAATACAAGCG
GAGATTGCGGAGTTTGCAACGAAGGGCGCGGAGGCGCAAGTGCTGAGACTTCGCCACTAG
AAGACGCTAGAGAGATGCGTTTGATGAAGATGTCATCCGAAGTTTGCCGATGTGAGATTA
TATGGGACACGTCATAAAGGACATAATGCGTGGTGGTTACGTCATAATGGTCGATGAAGT
GATTTTATACCTATATATTCTGCTACTCGTCATGTTTTCTTTTTTATTTATTTTGTTTTG
ACACTGTAAACTTTGTGTTGTCCATAAGGTACATCCGGGTAAGTATTCACCGGATAACAC
CAGACATTACGTCATACCACTCAACCGACATCAAATACAAAATTATAACATTTCTATTTC
CATCAACTGCGAAAGTTCTGTTATGGGGAACTCCCTTGCTTTCCCCTTCTTTTCACCAAG
AAATGATTCTCGTTCTTCAAATAAACACCGTCGTAGACATA
| Gene3D |
Laminin_N_sf (IPR038684) - T[31-276] 8.6E-71 - T[321-379] 1.6E-11 |
| SMART |
Laminin_N (IPR008211) - T[46-284] 6.5E-67 |
| ProSiteProfiles |
Laminin_N (IPR008211) - T[48-358] 49.806 |
| Pfam |
Laminin_N (IPR008211) - T[52-357] 1.4E-65 |
| SUPERFAMILY |
Galactose-bd-like_sf (IPR008979) - T[103-181] 4.93E-5 |
| Pfam |
Laminin_EGF (IPR002049) - T[359-400] 8.6E-6 - T[414-470] 3.4E-7 - T[478-518] 3.4E-8 |
| ProSiteProfiles |
Laminin_EGF (IPR002049) - T[359-413] 9.741 - T[414-477] 7.684 - T[478-527] 17.51 |
| SMART |
Laminin_EGF (IPR002049) - T[359-411] 2.4E-5 - T[414-475] 9.6E-7 - T[478-525] 8.9E-10 |
| ProSitePatterns |
Laminin_EGF (IPR002049) - T[441-475] . |
| SUPERFAMILY |
TIMP-like_OB-fold (IPR008993) - T[538-670] 1.1E-25 |
| ProSiteProfiles |
Netrin_domain (IPR001134) - T[541-670] 21.582 |
| SMART |
Netrin_module_non-TIMP (IPR018933) - T[555-664] 2.9E-16 |
| Pfam |
Netrin_module_non-TIMP (IPR018933) - T[557-663] 1.3E-19 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| NET1_HUMAN | 45.97 % | 315 | 4.67E-99 |
| NET3_HUMAN | 42.812 % | 258 | 2.31E-77 |
| NET5_HUMAN | 36.223 % | 203 | 3.9E-58 |