- Transcript 'Cisavi.CG.ENS81.R44....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R44.395294-407049.08161.t
Possible name(s)
PAX3; PAX6; PAX7
Gene model
Location
R44 [397,590 / 404,858]
Amino acid sequence
Length: 195
>Cisavi.CG.ENS81.R44.395294-407049.08161.p
AHGVRPCVISRQLRVSHGCVSKILCRYQETGSIKPGAIGGSKPKVAAADVENKIEEYKKE
NPGIFSWEIRERLIKEGICDRSNVPSVSSISRTLRAKGCDGDDLNRNRSSSSVGEPNDGG
GSDSESEPDLPLKRKQRRSRTTFSAEQLDELERCFERTHYPDIYTREELAQRTRLTEARV
QVWFSNRRARWRKQM
Nucleotide sequence
Length: 585
>Cisavi.CG.ENS81.R44.395294-407049.08161.t
GCACACGGAGTCCGGCCTTGCGTCATCAGTCGTCAGCTAAGGGTCTCTCATGGCTGTGTC
AGTAAAATTTTGTGCAGATACCAAGAAACGGGCTCCATAAAGCCTGGTGCCATAGGTGGA
AGCAAACCGAAGGTCGCTGCGGCAGACGTCGAAAATAAGATTGAAGAATACAAGAAAGAA
AATCCTGGGATCTTTAGCTGGGAAATCAGAGAGCGGCTAATAAAGGAGGGAATATGTGAT
CGAAGCAACGTTCCTTCCGTCAGTTCCATCAGCCGAACTTTGAGGGCGAAAGGATGTGAC
GGTGATGATTTAAATAGAAACCGGTCTTCATCTTCTGTTGGAGAACCAAACGATGGCGGA
GGATCTGACAGCGAGTCGGAGCCAGATCTTCCGTTGAAGAGGAAACAGCGACGAAGTCGA
ACAACCTTCAGCGCTGAGCAGTTGGACGAACTAGAAAGATGCTTCGAGAGAACGCACTAC
CCCGATATATACACACGCGAGGAATTAGCGCAGCGGACCAGACTCACCGAGGCGCGCGTT
CAGGTTTGGTTCAGCAATCGAAGAGCAAGATGGCGCAAGCAGATG
| SMART |
Paired_dom (IPR001523) - T[1-95] 3.4E-50 |
| Gene3D |
WH-like_DNA-bd_sf (IPR036388) - T[1-39] 5.0E-19 - T[40-98] 6.6E-32 |
| ProSiteProfiles |
Paired_dom (IPR001523) - T[1-97] 45.347 |
| SUPERFAMILY |
Homeobox-like_sf (IPR009057) - T[2-98] 1.97E-28 - T[119-194] 4.71E-27 |
| Pfam |
Paired_dom (IPR001523) - T[2-95] 3.0E-52 |
| ProSitePatterns |
Paired_dom (IPR001523) - T[5-21] . |
| PRINTS |
Paired_dom (IPR001523) - T[13-30] 5.1E-17 - T[31-48] 5.1E-17 |
| ProSiteProfiles |
Homeobox_dom (IPR001356) - T[134-194] 21.151 |
| SMART |
Homeobox_dom (IPR001356) - T[136-195] 8.7E-23 |
| Pfam |
Homeobox_dom (IPR001356) - T[137-193] 2.3E-23 |
| CDD |
Homeobox_dom (IPR001356) - T[137-195] 2.22525E-24 |
| ProSitePatterns |
Homeobox_CS (IPR017970) - T[169-192] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PAX7_HUMAN | 72.512 % | 296 | 1.83E-99 |
| PAX3_HUMAN | 70.892 % | 301 | 6.29E-102 |
| PAX6_HUMAN | 49.576 % | 207 | 6.9E-66 |