- Transcript 'Cisavi.CG.ENS81.R44....' >
- Transcript 'Cisavi.CG.ENS81.R44....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R44.395294-407049.08160.t
Possible name(s)
PAX3; PAX6; PAX7
Gene model
Location
R44 [397,587 / 404,948]
Amino acid sequence
Length: 186
>Cisavi.CG.ENS81.R44.395294-407049.08160.p
GQGRVNQLGGMFINGRPLPSHIRHKIVEMAAHGVRPCVISRQLRVSHGCVSKILCRYQET
GSIKPGAIGGSKPKVAAADVENKIEEYKKENPGIFSWEIRERLIKHNGQDRSDSESEPDL
PLKRKQRRSRTTFSAEQLDELERCFERTHYPDIYTREELAQRTRLTEARVQVWFSNRRAR
WRKQMA
Nucleotide sequence
Length: 558
>Cisavi.CG.ENS81.R44.395294-407049.08160.t
GGGCAAGGTAGAGTAAACCAACTGGGCGGTATGTTCATCAACGGGCGGCCGCTGCCCAGT
CATATTCGACATAAAATAGTCGAGATGGCGGCACACGGAGTCCGGCCTTGCGTCATCAGT
CGTCAGCTAAGGGTCTCTCATGGCTGTGTCAGTAAAATTTTGTGCAGATACCAAGAAACG
GGCTCCATAAAGCCTGGTGCCATAGGTGGAAGCAAACCGAAGGTCGCTGCGGCAGACGTC
GAAAATAAGATTGAAGAATACAAGAAAGAAAATCCTGGGATCTTTAGCTGGGAAATCAGA
GAGCGGCTAATAAAGCACAATGGGCAAGATAGATCTGACAGCGAGTCGGAGCCAGATCTT
CCGTTGAAGAGGAAACAGCGACGAAGTCGAACAACCTTCAGCGCTGAGCAGTTGGACGAA
CTAGAAAGATGCTTCGAGAGAACGCACTACCCCGATATATACACACGCGAGGAATTAGCG
CAGCGGACCAGACTCACCGAGGCGCGCGTTCAGGTTTGGTTCAGCAATCGAAGAGCAAGA
TGGCGCAAGCAGATGGCG
| ProSiteProfiles |
Paired_dom (IPR001523) - T[1-130] 51.309 |
| Gene3D |
WH-like_DNA-bd_sf (IPR036388) - T[1-69] 7.1E-39 - T[70-113] 1.1E-18 |
| Pfam |
Paired_dom (IPR001523) - T[1-113] 6.0E-62 |
| SMART |
Paired_dom (IPR001523) - T[1-123] 2.9E-68 |
| SUPERFAMILY |
Homeobox-like_sf (IPR009057) - T[3-112] 1.95E-35 - T[119-185] 5.56E-27 |
| PRINTS |
Paired_dom (IPR001523) - T[5-20] 2.4E-38 - T[23-41] 2.4E-38 - T[43-60] 2.4E-38 - T[61-78] 2.4E-38 |
| ProSitePatterns |
Paired_dom (IPR001523) - T[35-51] . |
| ProSiteProfiles |
Homeobox_dom (IPR001356) - T[124-184] 21.151 |
| SMART |
Homeobox_dom (IPR001356) - T[126-186] 3.2E-23 |
| Pfam |
Homeobox_dom (IPR001356) - T[127-183] 2.1E-23 |
| CDD |
Homeobox_dom (IPR001356) - T[127-185] 2.4437E-23 |
| ProSitePatterns |
Homeobox_CS (IPR017970) - T[159-182] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PAX7_HUMAN | 82.051 % | 203 | 1.61E-63 |
| PAX3_HUMAN | 59.016 % | 264 | 1.78E-87 |
| PAX4_HUMAN | 41.964 % | 165 | 2.74E-50 |