- Transcript 'Cisavi.CG.ENS81.R44....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R44.395294-407049.08159.t
Possible name(s)
PAX3; PAX6; PAX7
Gene model
Location
R44 [397,512 / 404,960]
Amino acid sequence
Length: 377
>Cisavi.CG.ENS81.R44.395294-407049.08159.p
VRFPGQGRVNQLGGMFINGRPLPSHIRHKIVEMAAHGVRPCVISRQLRVSHGCVSKILCR
YQETGSIKPGAIGGSKPKVAAADVENKIEEYKKENPGIFSWEIRERLIKEGICDRSNVPS
VSSISRTLRAKGCALARCFFAVWRLQRHMGAVKGPAHGQFYAAVPHLLLKTRANGMSLGS
PVPPVEQQPSLECCSVIILGLMLLKNHQEMLKTPKSRLRAKYLYRGEQVSGLTDHQSRLL
VQLQDSVYHYMKIRGKGQELLLDFEIKSNSEPNDGGGSDSESEPDLPLKRKQRRSRTTFS
AEQLDELERCFERTHYPDIYTREELAQRTRLTEARVQVWFSNRRARWRKQMAAQQFHGIP
PHHPHHLSPHLGYPHPM
Nucleotide sequence
Length: 1,131
>Cisavi.CG.ENS81.R44.395294-407049.08159.t
GTGCGATTTCCAGGGCAAGGTAGAGTAAACCAACTGGGCGGTATGTTCATCAACGGGCGG
CCGCTGCCCAGTCATATTCGACATAAAATAGTCGAGATGGCGGCACACGGAGTCCGGCCT
TGCGTCATCAGTCGTCAGCTAAGGGTCTCTCATGGCTGTGTCAGTAAAATTTTGTGCAGA
TACCAAGAAACGGGCTCCATAAAGCCTGGTGCCATAGGTGGAAGCAAACCGAAGGTCGCT
GCGGCAGACGTCGAAAATAAGATTGAAGAATACAAGAAAGAAAATCCTGGGATCTTTAGC
TGGGAAATCAGAGAGCGGCTAATAAAGGAGGGAATATGTGATCGAAGCAACGTTCCTTCC
GTCAGTTCCATCAGCCGAACTTTGAGGGCGAAAGGATGCGCCCTCGCTCGTTGTTTTTTT
GCGGTTTGGCGTTTGCAGCGGCATATGGGAGCGGTTAAGGGACCAGCGCACGGTCAATTT
TACGCCGCTGTTCCGCACCTTCTGCTCAAGACGCGCGCCAACGGCATGTCCCTGGGAAGT
CCTGTGCCCCCTGTCGAGCAGCAACCGAGTTTGGAATGTTGCTCAGTTATTATTTTGGGT
TTAATGTTATTGAAAAATCATCAAGAAATGCTAAAAACACCTAAATCGCGTTTACGAGCA
AAATATTTATACCGTGGTGAGCAAGTATCCGGCTTAACTGACCACCAGTCCCGGCTTCTT
GTTCAGCTTCAAGATAGCGTTTATCATTACATGAAAATACGAGGAAAAGGCCAAGAGCTA
TTATTAGACTTCGAGATCAAATCGAATAGTGAACCAAACGATGGCGGAGGATCTGACAGC
GAGTCGGAGCCAGATCTTCCGTTGAAGAGGAAACAGCGACGAAGTCGAACAACCTTCAGC
GCTGAGCAGTTGGACGAACTAGAAAGATGCTTCGAGAGAACGCACTACCCCGATATATAC
ACACGCGAGGAATTAGCGCAGCGGACCAGACTCACCGAGGCGCGCGTTCAGGTTTGGTTC
AGCAATCGAAGAGCAAGATGGCGCAAGCAGATGGCGGCACAGCAGTTCCATGGAATTCCA
CCCCACCACCCACACCACTTGTCCCCTCACTTGGGTTATCCCCACCCCATG
| ProSiteProfiles |
Paired_dom (IPR001523) - T[5-131] 59.958 |
| Pfam |
Paired_dom (IPR001523) - T[5-129] 3.5E-71 |
| Gene3D |
WH-like_DNA-bd_sf (IPR036388) - T[5-73] 2.6E-38 - T[74-132] 2.0E-31 |
| CDD |
Paired_dom (IPR001523) - T[5-132] 1.17413E-81 |
| SMART |
Paired_dom (IPR001523) - T[5-129] 4.4E-87 |
| SUPERFAMILY |
Homeobox-like_sf (IPR009057) - T[7-132] 1.13E-39 - T[285-356] 1.67E-27 |
| PRINTS |
Paired_dom (IPR001523) - T[9-24] 2.3E-37 - T[27-45] 2.3E-37 - T[47-64] 2.3E-37 - T[65-82] 2.3E-37 |
| ProSitePatterns |
Paired_dom (IPR001523) - T[39-55] . |
| ProSiteProfiles |
Homeobox_dom (IPR001356) - T[290-350] 21.151 |
| SMART |
Homeobox_dom (IPR001356) - T[292-354] 5.8E-28 |
| CDD |
Homeobox_dom (IPR001356) - T[293-351] 2.93866E-24 |
| Pfam |
Homeobox_dom (IPR001356) - T[293-349] 7.1E-23 |
| ProSitePatterns |
Homeobox_CS (IPR017970) - T[325-348] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PAX2_HUMAN | 42.202 % | 208 | 1.88E-63 |
| PAX7_HUMAN | 83.846 % | 225 | 3.51E-69 |
| PAX3_HUMAN | 82.812 % | 229 | 5.57E-71 |