- Transcript 'Cisavi.CG.ENS81.R44....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R44.395294-407049.08158.t
Possible name(s)
PAX3; PAX6; PAX7
Gene model
Location
R44 [395,293 / 399,773]
Amino acid sequence
Length: 428
>Cisavi.CG.ENS81.R44.395294-407049.08158.p
SRTTFSAEQLDELERCFERTHYPDIYTREELAQRTRLTEARVQVWFSNRRARWRKQMAAQ
QFHGIPPHHPHHLSPHLGYPHPMSGAVGQAAHNYMLQTSGAHHAQSMHDSFAHTASNHEP
GASLHRPHASVLSSPVHHPSQAIRYDSTDPLNQSAAAAYGLMGASAAAAAAAARYSQYPS
AAAFGEAYPIHYHHHSTSPPTGSSIFGFPPSAHNRQASNSVELNTAVNPHSGPNSSPANV
GSPSDGGTHSLHPHFGLGQNPRPTSNQRTHSHHNQHQSADTNTQPTSPSSNNDGHQSAGI
ESQSRAYSSIAAQHDIHAISTSVSGHQSAAMLQSSVEHPGNVFADRVAGSRTGYVGGGQA
GFATGEGLATSTATSHNSYASCQYSPYGQASGDYGSAGIAALRMKSREHSAALGLIPVGA
GPSIQHAY
Nucleotide sequence
Length: 1,287
>Cisavi.CG.ENS81.R44.395294-407049.08158.t
AGTCGAACAACCTTCAGCGCTGAGCAGTTGGACGAACTAGAAAGATGCTTCGAGAGAACG
CACTACCCCGATATATACACACGCGAGGAATTAGCGCAGCGGACCAGACTCACCGAGGCG
CGCGTTCAGGTTTGGTTCAGCAATCGAAGAGCAAGATGGCGCAAGCAGATGGCGGCACAG
CAGTTCCATGGAATTCCACCCCACCACCCACACCACTTGTCCCCTCACTTGGGTTATCCC
CACCCCATGTCAGGCGCGGTGGGCCAGGCAGCACATAACTACATGTTACAGACTAGCGGC
GCCCACCATGCACAAAGTATGCACGACAGCTTTGCACATACAGCTTCCAATCATGAACCA
GGAGCGTCACTTCATCGCCCACACGCCTCCGTCCTCTCGTCACCAGTGCATCACCCCTCA
CAGGCTATAAGGTATGATAGCACTGACCCGTTGAATCAGAGTGCGGCGGCAGCTTATGGA
CTAATGGGAGCTTCTGCGGCTGCCGCTGCGGCTGCTGCAAGATACAGCCAATACCCGTCG
GCTGCTGCATTCGGGGAAGCCTACCCAATACATTACCACCATCACTCGACATCTCCACCT
ACCGGAAGCTCGATCTTTGGATTCCCGCCATCAGCGCACAACAGACAAGCTTCGAACTCT
GTAGAACTAAATACTGCGGTAAATCCCCATTCTGGCCCCAACTCATCTCCTGCCAATGTT
GGGTCACCCAGCGACGGAGGGACTCACTCACTTCACCCGCATTTCGGTTTGGGTCAAAAT
CCTCGCCCCACCAGCAACCAACGAACCCACTCTCATCATAACCAACACCAGTCAGCAGAC
ACCAACACCCAACCAACGTCACCTTCATCAAATAATGACGGACATCAATCAGCCGGAATC
GAATCACAGTCTCGAGCTTATTCCTCGATAGCTGCACAGCATGATATCCACGCCATAAGC
ACATCAGTAAGCGGCCATCAATCTGCCGCCATGCTACAGTCCAGCGTGGAACATCCCGGC
AATGTGTTCGCCGACAGAGTCGCGGGATCAAGGACGGGGTACGTAGGTGGAGGACAAGCT
GGCTTTGCAACAGGCGAAGGACTGGCCACGTCCACTGCGACATCCCATAATTCTTACGCA
TCTTGCCAGTATTCACCATACGGTCAAGCCAGTGGTGATTATGGGAGTGCCGGAATAGCT
GCTCTGCGAATGAAATCCCGGGAGCACAGCGCGGCGCTTGGACTCATTCCAGTTGGCGCG
GGTCCAAGCATCCAACATGCGTATTGA
| SMART |
Homeobox_dom (IPR001356) - T[1-60] 1.6E-23 |
| ProSiteProfiles |
Homeobox_dom (IPR001356) - T[1-56] 19.823 |
| Pfam |
Homeobox_dom (IPR001356) - T[1-55] 4.1E-22 |
| SUPERFAMILY |
Homeobox-like_sf (IPR009057) - T[1-62] 1.37E-24 |
| CDD |
Homeobox_dom (IPR001356) - T[2-57] 1.78791E-25 |
| ProSitePatterns |
Homeobox_CS (IPR017970) - T[31-54] . |
| ProSiteProfiles |
OAR_dom (IPR003654) - T[397-410] 10.752 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ALX4_HUMAN | 61.194 % | 99.8 | 5.79E-23 |
| PAX7_HUMAN | 72.5 % | 122 | 2.02E-30 |
| PAX3_HUMAN | 72.84 % | 121 | 3.2E-30 |