Aniseed - Transcript Card

Sequences

Amino acid sequence

Length: 664

>Cisavi.CG.ENS81.R44.395294-407049.08157.p
MMHPTSNFRPAFPLEGQGRVNQLGGMFINGRPLPSHIRHKIVEMAAHGVRPCVISRQLRV
SHGCVSKILCRYQETGSIKPGAIGGSKPKVAAADVENKIEEYKKENPGIFSWEIRERLIK
EGICDRSNVPSVSSISRTLRAKGCDVENETEPNGRLDPGNRSSSSVGEPNDGGGSDSESE
PDLPLKRKQRRSRTTFSAEQLDELERCFERTHYPDIYTREELAQRTRLTEARVQVWFSNR
RARWRKQMAAQQFHGIPPHHPHHLSPHLGYPHPMSGAVGQAAHNYMLQTSGAHHAQSMHD
SFAHTASNHGKNKYFLKFKSLKHTFLGTYRYLGNNSKQISFNLEPGASLHRPHASVLSSP
VHHPSQAIRYDSTDPLNQSAAAAYGLMGASAAAAAAAARYSQYPSAAAFGEAYPIHYHHH
STSPPTGSSIFGFPPSAHNRQASNSVELNTAVNPHSGPNSSPANVGSPSDGGTHSLHPHF
GLGQNPRPTSNQRTHSHHNQHQSADTNTQPTSPSSNNDGHQSAGRVKPINCLVFRIESQS
RAYSSIAAQHDIHAISTSVSGHQSAAMLQSSVEHPGNVFADRVAGSRTGYVGGGQAGFAT
GEGLATSTATSHNSYASCQYSPYGQASGDYGSAGIAALRMKSREHSAALGLIPVGAGPSI
QHAY

Nucleotide sequence

Length: 1,995

>Cisavi.CG.ENS81.R44.395294-407049.08157.t
ATGATGCACCCAACTTCAAATTTCAGACCTGCTTTTCCATTAGAAGGGCAAGGTAGAGTA
AACCAACTGGGCGGTATGTTCATCAACGGGCGGCCGCTGCCCAGTCATATTCGACATAAA
ATAGTCGAGATGGCGGCACACGGAGTCCGGCCTTGCGTCATCAGTCGTCAGCTAAGGGTC
TCTCATGGCTGTGTCAGTAAAATTTTGTGCAGATACCAAGAAACGGGCTCCATAAAGCCT
GGTGCCATAGGTGGAAGCAAACCGAAGGTCGCTGCGGCAGACGTCGAAAATAAGATTGAA
GAATACAAGAAAGAAAATCCTGGGATCTTTAGCTGGGAAATCAGAGAGCGGCTAATAAAG
GAGGGAATATGTGATCGAAGCAACGTTCCTTCCGTCAGTTCCATCAGCCGAACTTTGAGG
GCGAAAGGATGTGACGTAGAAAATGAAACCGAGCCCAATGGCCGTCTCGATCCAGGAAAC
CGGTCTTCATCTTCTGTTGGAGAACCAAACGATGGCGGAGGATCTGACAGCGAGTCGGAG
CCAGATCTTCCGTTGAAGAGGAAACAGCGACGAAGTCGAACAACCTTCAGCGCTGAGCAG
TTGGACGAACTAGAAAGATGCTTCGAGAGAACGCACTACCCCGATATATACACACGCGAG
GAATTAGCGCAGCGGACCAGACTCACCGAGGCGCGCGTTCAGGTTTGGTTCAGCAATCGA
AGAGCAAGATGGCGCAAGCAGATGGCGGCACAGCAGTTCCATGGAATTCCACCCCACCAC
CCACACCACTTGTCCCCTCACTTGGGTTATCCCCACCCCATGTCAGGCGCGGTGGGCCAG
GCAGCACATAACTACATGTTACAGACTAGCGGCGCCCACCATGCACAAAGTATGCACGAC
AGCTTTGCACATACAGCTTCCAATCATGGTAAGAATAAATATTTTTTAAAATTTAAATCC
CTAAAACATACATTTTTAGGTACTTATAGGTACTTAGGTAATAATTCAAAACAAATTTCT
TTTAATTTAGAACCAGGAGCGTCACTTCATCGCCCACACGCCTCCGTCCTCTCGTCACCA
GTGCATCACCCCTCACAGGCTATAAGGTATGATAGCACTGACCCGTTGAATCAGAGTGCG
GCGGCAGCTTATGGACTAATGGGAGCTTCTGCGGCTGCCGCTGCGGCTGCTGCAAGATAC
AGCCAATACCCGTCGGCTGCTGCATTCGGGGAAGCCTACCCAATACATTACCACCATCAC
TCGACATCTCCACCTACCGGAAGCTCGATCTTTGGATTCCCGCCATCAGCGCACAACAGA
CAAGCTTCGAACTCTGTAGAACTAAATACTGCGGTAAATCCCCATTCTGGCCCCAACTCA
TCTCCTGCCAATGTTGGGTCACCCAGCGACGGAGGGACTCACTCACTTCACCCGCATTTC
GGTTTGGGTCAAAATCCTCGCCCCACCAGCAACCAACGAACCCACTCTCATCATAACCAA
CACCAGTCAGCAGACACCAACACCCAACCAACGTCACCTTCATCAAATAATGACGGACAT
CAATCAGCCGGTCGGGTTAAACCTATAAACTGCCTGGTATTCAGAATCGAATCACAGTCT
CGAGCTTATTCCTCGATAGCTGCACAGCATGATATCCACGCCATAAGCACATCAGTAAGC
GGCCATCAATCTGCCGCCATGCTACAGTCCAGCGTGGAACATCCCGGCAATGTGTTCGCC
GACAGAGTCGCGGGATCAAGGACGGGGTACGTAGGTGGAGGACAAGCTGGCTTTGCAACA
GGCGAAGGACTGGCCACGTCCACTGCGACATCCCATAATTCTTACGCATCTTGCCAGTAT
TCACCATACGGTCAAGCCAGTGGTGATTATGGGAGTGCCGGAATAGCTGCTCTGCGAATG
AAATCCCGGGAGCACAGCGCGGCGCTTGGACTCATTCCAGTTGGCGCGGGTCCAAGCATC
CAACATGCGTATTGA

InterProScan

Gene3D	WH-like_DNA-bd_sf (IPR036388) - T[16-84] 6.0E-38 - T[85-143] 4.5E-31
CDD	Paired_dom (IPR001523) - T[16-143] 3.15257E-80
Pfam	Paired_dom (IPR001523) - T[16-140] 9.7E-71
ProSiteProfiles	Paired_dom (IPR001523) - T[16-142] 59.958
SMART	Paired_dom (IPR001523) - T[16-140] 4.4E-87
SUPERFAMILY	Homeobox-like_sf (IPR009057) - T[18-143] 2.69E-39 - T[182-253] 3.76E-27
PRINTS	Paired_dom (IPR001523) - T[20-35] 1.6E-36 - T[38-56] 1.6E-36 - T[58-75] 1.6E-36 - T[76-93] 1.6E-36
ProSitePatterns	Paired_dom (IPR001523) - T[50-66] .
ProSiteProfiles	Homeobox_dom (IPR001356) - T[187-247] 21.151
SMART	Homeobox_dom (IPR001356) - T[189-251] 5.8E-28
Pfam	Homeobox_dom (IPR001356) - T[190-246] 1.6E-22
CDD	Homeobox_dom (IPR001356) - T[190-248] 1.84227E-26
ProSitePatterns	Homeobox_CS (IPR017970) - T[222-245] .
ProSiteProfiles	OAR_dom (IPR003654) - T[633-646] 10.752