- Clone 'cijv011l03' >
- Transcript 'Cisavi.CG.ENS81.R13....' >
- Transcript 'Cisavi.CG.ENS81.R44....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R44.32209-34873.05412.t
Possible name(s)
HOXA3; MNX1; PDX1
Gene model
Location
R44 [32,208 / 34,873]
Amino acid sequence
Length: 400
>Cisavi.CG.ENS81.R44.32209-34873.05412.p
IMLSTSTSALVDVLRERLRHANEVNNHPDQSYVVLEERVSDSDVDRKSDSTPPPFITGSP
TSSSELSSPGRRSSDPRKRKNENLIKEDTIAPKKAKFSIDSLLASDSDTKGDWPRNGGSF
PAYNFEQACQVPRFTPNHLDFYNKDKTEENAVESNKNQHHLPTYPRSHLYPYFPVHPFQN
GITNPSILHSPSDPPASSPPASLSPISSAASSPKPSREDEQSPNHDDGHSPNQTHDFRHE
ASSHNPPIGYYPGSFPHPMHLHGSQSFPHMLAGRVPNLPLVGAFGGHPFRPQFNLNTIPI
SWLRNDAVLRSLSEFAAHPGLMSRSRRPRTAFTSQQLLELERQFKLNKYLSRPKRFEVAT
TLQLTETQVKIWFQNRRMKWKRSKKSRAFQGSTSSAEKKD
Nucleotide sequence
Length: 1,200
>Cisavi.CG.ENS81.R44.32209-34873.05412.t
ATAATGCTCAGTACTTCCACGTCAGCTCTGGTCGATGTTTTGCGTGAGCGATTACGCCAC
GCAAATGAAGTCAACAACCACCCGGATCAGAGCTATGTAGTGTTGGAAGAACGAGTGTCG
GATTCCGACGTTGACCGAAAATCCGACTCCACTCCCCCGCCGTTTATCACTGGGTCGCCG
ACCTCGTCGTCAGAACTCAGTTCGCCCGGCAGAAGATCATCTGATCCCCGCAAAAGGAAA
AATGAGAATCTGATAAAAGAGGACACAATCGCACCAAAAAAGGCTAAATTTTCAATTGAT
TCACTTTTGGCTTCAGATTCCGACACCAAAGGCGACTGGCCTCGCAACGGCGGAAGTTTT
CCAGCGTACAACTTTGAACAGGCGTGTCAAGTCCCCAGATTTACGCCAAATCACCTCGAC
TTTTACAATAAGGACAAGACAGAAGAAAATGCAGTCGAATCTAATAAAAACCAACACCAC
CTTCCGACGTACCCAAGAAGCCACCTATACCCTTACTTTCCAGTGCACCCATTCCAAAAT
GGAATCACCAACCCCTCGATCCTACACTCTCCATCGGATCCTCCTGCATCTTCACCTCCC
GCATCATTATCTCCCATTTCATCAGCTGCGTCTTCACCAAAACCATCCCGGGAAGATGAG
CAATCCCCGAATCACGACGATGGCCACTCCCCGAACCAAACCCATGACTTCAGACACGAA
GCATCATCACATAACCCACCTATAGGTTATTATCCAGGATCTTTCCCCCACCCAATGCAT
TTACACGGCTCACAAAGCTTCCCCCACATGTTGGCAGGACGCGTACCCAACCTTCCACTC
GTAGGAGCGTTCGGAGGTCATCCTTTTCGACCCCAATTCAATTTAAACACCATTCCGATA
TCTTGGCTGAGAAACGATGCTGTTCTTCGAAGTTTGAGTGAATTTGCCGCCCACCCTGGA
CTAATGAGCCGCTCACGACGCCCAAGAACCGCTTTCACCTCCCAACAGCTGCTAGAACTT
GAACGACAATTCAAACTAAACAAGTATTTGTCGCGACCCAAGCGATTTGAAGTTGCCACA
ACATTACAACTAACCGAAACTCAGGTGAAAATTTGGTTCCAAAACCGACGAATGAAGTGG
AAACGAAGCAAGAAATCACGTGCTTTCCAAGGTTCGACTTCATCGGCCGAGAAGAAGGAT
| SUPERFAMILY |
Homeobox-like_sf (IPR009057) - T[313-385] 8.13E-25 |
| ProSiteProfiles |
Homeobox_dom (IPR001356) - T[323-383] 22.188 |
| SMART |
Homeobox_dom (IPR001356) - T[325-387] 1.9E-25 |
| CDD |
Homeobox_dom (IPR001356) - T[326-384] 1.7228E-22 |
| Pfam |
Homeobox_dom (IPR001356) - T[326-382] 1.5E-21 |
| PRINTS |
Homeobox_metazoa (IPR020479) - T[347-358] 4.1E-8 - T[362-372] 4.1E-8 - T[372-381] 4.1E-8 |
| ProSitePatterns |
Homeobox_CS (IPR017970) - T[358-381] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HXA3_HUMAN | 57.746 % | 94.4 | 3.87E-21 |
| PDX1_HUMAN | 40.769 % | 92.8 | 2.24E-21 |
| MNX1_HUMAN | 61.947 % | 131 | 2.23E-34 |