Aniseed - Transcript Card

Sequences

Amino acid sequence

Length: 706

>Cisavi.CG.ENS81.R435.235416-244353.07674.p
MASSIDLLTKINDEFLTCQICFETYTRPKSLNCQHTFCLKCLEEYTPPNSVSVMCPTCRS
EQPLTEDGINGLKDNFFISSMSDMLKTCIGRNATLVLNCQTILSETAYKIHDGEAAKIYC
QSCQCPICHECVESGHSRHRRCSLKEEVLNQSHQIENLLKTAKGKADVLRTLQKSLKDIK
QSKKRDRDNGEAEIERICEIFISTIHRRKQELTDELHNMHAAEVKRINADEDSVEMQLSS
LVSCTEFSRKVLEYGTPKEVLGLNNQMTQILHQLLETHPATTYHNTDQTDNIQFDTNADA
SVRVIRDNLGRLTIQKATFDESINKVGWGDVINVGKLYTWFVLARRNGRTILQRVESTET
KLVVQVYQWEWAPMSTSIRVYTGKVGGSPLTLLMAINIMDIISTQVIVPSVVKTTDVRFS
KVKTINIWSRFMLLFCVQIGKQGIGDGEFESTPNLAVNSVNEIITSDYDGAKIQIFDPQG
NFKDSFFVYNPQVNKRMCKPAGIAILDNDDIVVCCEDQVHIWTHEGKSVLGFGKGQFGNC
SSICVNSENRIVVADVGKHCISVFTDTGKLLLQFGAQGKGESKLVEPRYVACDSQNNIIV
SDGGDCSVKKFSSQGEFLLSFGAEGPERGQFQGPRGICTDENDNILVADCWNHRVDIFTP
DGCFMRHIATGADSLHFPWCISLTTNGKLVLSEDYSWSVKVFTLPG

Nucleotide sequence

Length: 2,118

>Cisavi.CG.ENS81.R435.235416-244353.07674.t
ATGGCGAGTTCGATTGATCTGCTGACGAAGATCAACGATGAGTTCCTCACATGTCAGATA
TGCTTCGAGACCTACACGCGACCGAAGAGTCTCAACTGCCAGCACACCTTCTGCCTGAAG
TGTCTTGAGGAGTACACTCCGCCCAACAGTGTGAGCGTGATGTGCCCGACGTGCCGCAGC
GAGCAACCACTCACGGAAGACGGAATCAACGGATTGAAGGACAACTTCTTCATCTCAAGC
ATGTCCGACATGTTGAAAACCTGCATAGGAAGAAACGCAACACTTGTATTAAATTGTCAA
ACAATCTTAAGCGAGACCGCCTATAAGATCCACGACGGAGAGGCTGCCAAGATCTACTGC
CAGTCCTGCCAATGTCCGATCTGCCACGAATGTGTGGAGAGCGGCCATTCAAGACACAGG
CGATGCTCGCTCAAAGAAGAAGTCCTCAACCAAAGTCACCAGATCGAGAACCTTCTAAAG
ACTGCGAAGGGGAAGGCGGACGTGCTGCGAACGCTGCAGAAGTCGTTGAAAGATATAAAA
CAGAGCAAGAAAAGAGATCGGGACAACGGGGAAGCTGAGATCGAGAGGATTTGCGAGATC
TTTATCAGCACGATACACAGGCGGAAACAAGAGTTGACGGACGAATTGCACAACATGCAC
GCGGCCGAGGTGAAACGAATCAACGCGGATGAAGACTCGGTCGAAATGCAGCTCAGCTCG
CTGGTATCTTGCACCGAATTCTCACGCAAGGTTCTGGAATATGGCACGCCGAAGGAGGTC
CTGGGACTCAACAACCAAATGACACAAATCCTCCATCAGTTACTAGAGACTCACCCCGCT
ACCACCTACCATAACACCGACCAAACTGATAACATTCAGTTCGACACTAACGCAGATGCG
AGTGTTAGAGTGATCCGAGATAATCTTGGAAGGTTGACCATACAGAAGGCAACATTTGAC
GAGAGCATAAACAAAGTAGGTTGGGGTGATGTTATTAACGTGGGGAAATTGTATACATGG
TTCGTTTTGGCACGACGGAACGGTAGAACCATCCTACAGAGAGTCGAATCGACGGAAACC
AAACTTGTTGTTCAGGTATATCAGTGGGAGTGGGCGCCAATGTCAACTTCGATTCGCGTT
TATACTGGGAAAGTGGGGGGTTCGCCATTGACCTTGTTGATGGCAATTAACATAATGGAT
ATCATCTCGACACAGGTCATTGTCCCAAGCGTTGTGAAAACAACCGATGTGCGGTTTTCG
AAGGTTAAAACAATAAATATCTGGTCAAGGTTTATGTTGCTATTTTGTGTTCAGATCGGG
AAACAAGGGATTGGAGATGGCGAGTTCGAATCCACCCCGAACCTCGCCGTCAACTCTGTC
AACGAAATTATAACGTCGGATTATGATGGAGCGAAGATTCAGATATTCGACCCGCAGGGA
AACTTCAAAGACTCGTTTTTTGTTTATAATCCCCAGGTAAACAAGAGAATGTGCAAGCCG
GCTGGGATCGCGATTCTAGATAATGATGATATAGTGGTGTGCTGCGAGGACCAGGTACAT
ATATGGACGCACGAAGGCAAGAGCGTTCTGGGCTTCGGGAAAGGTCAATTCGGCAATTGC
TCGAGCATCTGCGTCAACAGTGAGAATCGCATTGTGGTGGCCGACGTCGGGAAACACTGT
ATTTCGGTGTTCACCGACACTGGGAAACTGCTCCTGCAATTCGGGGCGCAAGGAAAGGGC
GAAAGCAAGCTGGTTGAACCCCGTTACGTGGCGTGCGACTCGCAGAATAATATTATTGTG
TCGGACGGTGGCGACTGCAGTGTGAAAAAGTTCTCTTCGCAAGGCGAATTTTTGCTGAGT
TTCGGGGCTGAAGGGCCGGAACGGGGTCAGTTCCAGGGTCCACGGGGAATTTGCACAGAT
GAGAATGATAACATACTGGTCGCTGACTGCTGGAACCATAGAGTTGACATATTCACGCCG
GACGGCTGCTTTATGAGGCATATTGCCACTGGAGCAGACAGTCTACACTTCCCGTGGTGC
ATTTCTCTCACCACCAATGGCAAACTGGTGTTGTCGGAGGATTATAGCTGGTCGGTCAAA
GTATTCACTCTTCCAGGT

InterProScan

Gene3D	Znf_RING/FYVE/PHD (IPR013083) - T[7-92] 1.0E-15
SMART	Znf_RING (IPR001841) - T[18-58] 3.4E-7
Pfam	Znf-RING_LisH (IPR027370) - T[18-56] 1.5E-8
ProSiteProfiles	Znf_RING (IPR001841) - T[18-59] 13.138
ProSitePatterns	Znf_RING_CS (IPR017907) - T[33-42] .
SMART	Znf_B-box (IPR000315) - T[103-144] 0.0091
CDD	Znf_B-box (IPR000315) - T[110-144] 1.53677E-8
Pfam	Znf_B-box (IPR000315) - T[110-144] 4.6E-7
ProSiteProfiles	Znf_B-box (IPR000315) - T[111-144] 9.271
Gene3D	6-blade_b-propeller_TolB-like (IPR011042) - T[427-622] 1.5E-43 - T[623-706] 1.3E-19
ProSiteProfiles	NHL_repeat_subgr (IPR013017) - T[438-479] 7.093 - T[524-567] 11.39 - T[571-614] 10.835 - T[618-661] 15.07 - T[662-705] 5.161
Pfam	NHL_repeat (IPR001258) - T[537-564] 6.9E-6 - T[631-658] 4.6E-7