- Clone 'csef027a02' >
- Transcript 'Cisavi.CG.ENS81.R435...' >
- EST 'AHC0AAA226YF05_RM1' >
- Transcript 'Moocul.CG.ELv1_2.S43...' >
- Transcript 'Cisavi.CG.ENS81.R435...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R435.235416-244353.07672.t
Possible name(s)
TRIM2; TRIM3; TRIM71
Gene model
Location
R435 [235,415 / 244,353]
Amino acid sequence
Length: 869
>Cisavi.CG.ENS81.R435.235416-244353.07672.p
MMASSIDLLTKINDEFLTCQICFETYTRPKSLNCQHTFCLKCLEEYTPPNSVSVMCPTCR
SEQPLTEDGINGLKDNFFISSMSDMLKTVKEIRSEDKDGTSLLRVGRLMLSESCGIHDGE
AAKIYCQSCQCPICHECVESGHSRHRRCSLKEEVLNQSHQIENLLKTAKGKADVLRTLQK
SLKDIKQSKKRDRDNGEAEIERICEIFISTIHRRKQELTDELHNMHAAEVKRINADEDSV
EMQLSSLVSCTEFSRKVLEYGTPKEVLGLNNQMTQILHQLLETHPATTYHNTDQTDNIQF
DTNADASVRVIRDNLGRLTIQKATFDESINKVGWGDVINVGKLYTWFVLARRNGRTILQR
VESTETKLVVQVYQWEWAPMSTSIRVYTGKVGGSPLTLLMAINIMDIISTQVIVPSVVKT
TDVRFSKVKTINIWSRFMLLFCVQIGKQGIGDGEFESTPNLAVNSVNEIITSDYDGAKIQ
IFDPQGNFKDSFFVYNPQVNKRMCKPAGIAILDNDDIVVCCEDQVHIWTHEGKSVLGFGK
GQFGNCSSICVNSENRIVVADVGKHCISVFTDTGKLLLQFGAQGKGESKLVEPRYVACDS
QNNIIVSDGGDCSVKKFSSQGEFLLSFGAEGPERGQFQGPRGICTDENDNILVADCWNHR
VDIFTPDGCFMRHIATGADSLHFPWCISLTTNGKLVLSEDYSWSVKVFTLPEYLHESTIS
SLDEIISPTTLIPDFDQLAGQFDLPNLLSNKVSWWLTSPNSQDPDSAVHAMTNGNIHNTI
ATTSVTRKPSKPLTSKKSSSSDSDLTAMTPISPVSPSTPSLSSQQDALTNGAITGSNGSL
NSAGSGKMNFPGKVTTLNDHMPVAIVNGV
Nucleotide sequence
Length: 2,832
>Cisavi.CG.ENS81.R435.235416-244353.07672.t
TTCGCGGGACACATGATGGCGAGTTCGATTGATCTGCTGACGAAGATCAACGATGAGTTC
CTCACATGTCAGATATGCTTCGAGACCTACACGCGACCGAAGAGTCTCAACTGCCAGCAC
ACCTTCTGCCTGAAGTGTCTTGAGGAGTACACTCCGCCCAACAGTGTGAGCGTGATGTGC
CCGACGTGCCGCAGCGAGCAACCACTCACGGAAGACGGAATCAACGGATTGAAGGACAAC
TTCTTCATCTCAAGCATGTCCGACATGTTGAAAACCGTCAAGGAGATTCGTAGCGAGGAT
AAAGACGGAACTTCGCTGCTGAGAGTGGGTAGATTGATGTTATCAGAGTCTTGTGGCATC
CACGACGGAGAGGCTGCCAAGATCTACTGCCAGTCCTGCCAATGTCCGATCTGCCACGAA
TGTGTGGAGAGCGGCCATTCAAGACACAGGCGATGCTCGCTCAAAGAAGAAGTCCTCAAC
CAAAGTCACCAGATCGAGAACCTTCTAAAGACTGCGAAGGGGAAGGCGGACGTGCTGCGA
ACGCTGCAGAAGTCGTTGAAAGATATAAAACAGAGCAAGAAAAGAGATCGGGACAACGGG
GAAGCTGAGATCGAGAGGATTTGCGAGATCTTTATCAGCACGATACACAGGCGGAAACAA
GAGTTGACGGACGAATTGCACAACATGCACGCGGCCGAGGTGAAACGAATCAACGCGGAT
GAAGACTCGGTCGAAATGCAGCTCAGCTCGCTGGTATCTTGCACCGAATTCTCACGCAAG
GTTCTGGAATATGGCACGCCGAAGGAGGTCCTGGGACTCAACAACCAAATGACACAAATC
CTCCATCAGTTACTAGAGACTCACCCCGCTACCACCTACCATAACACCGACCAAACTGAT
AACATTCAGTTCGACACTAACGCAGATGCGAGTGTTAGAGTGATCCGAGATAATCTTGGA
AGGTTGACCATACAGAAGGCAACATTTGACGAGAGCATAAACAAAGTAGGTTGGGGTGAT
GTTATTAACGTGGGGAAATTGTATACATGGTTCGTTTTGGCACGACGGAACGGTAGAACC
ATCCTACAGAGAGTCGAATCGACGGAAACCAAACTTGTTGTTCAGGTATATCAGTGGGAG
TGGGCGCCAATGTCAACTTCGATTCGCGTTTATACTGGGAAAGTGGGGGGTTCGCCATTG
ACCTTGTTGATGGCAATTAACATAATGGATATCATCTCGACACAGGTCATTGTCCCAAGC
GTTGTGAAAACAACCGATGTGCGGTTTTCGAAGGTTAAAACAATAAATATCTGGTCAAGG
TTTATGTTGCTATTTTGTGTTCAGATCGGGAAACAAGGGATTGGAGATGGCGAGTTCGAA
TCCACCCCGAACCTCGCCGTCAACTCTGTCAACGAAATTATAACGTCGGATTATGATGGA
GCGAAGATTCAGATATTCGACCCGCAGGGAAACTTCAAAGACTCGTTTTTTGTTTATAAT
CCCCAGGTAAACAAGAGAATGTGCAAGCCGGCTGGGATCGCGATTCTAGATAATGATGAT
ATAGTGGTGTGCTGCGAGGACCAGGTACATATATGGACGCACGAAGGCAAGAGCGTTCTG
GGCTTCGGGAAAGGTCAATTCGGCAATTGCTCGAGCATCTGCGTCAACAGTGAGAATCGC
ATTGTGGTGGCCGACGTCGGGAAACACTGTATTTCGGTGTTCACCGACACTGGGAAACTG
CTCCTGCAATTCGGGGCGCAAGGAAAGGGCGAAAGCAAGCTGGTTGAACCCCGTTACGTG
GCGTGCGACTCGCAGAATAATATTATTGTGTCGGACGGTGGCGACTGCAGTGTGAAAAAG
TTCTCTTCGCAAGGCGAATTTTTGCTGAGTTTCGGGGCTGAAGGGCCGGAACGGGGTCAG
TTCCAGGGTCCACGGGGAATTTGCACAGATGAGAATGATAACATACTGGTCGCTGACTGC
TGGAACCATAGAGTTGACATATTCACGCCGGACGGCTGCTTTATGAGGCATATTGCCACT
GGAGCAGACAGTCTACACTTCCCGTGGTGCATTTCTCTCACCACCAATGGCAAACTGGTG
TTGTCGGAGGATTATAGCTGGTCGGTCAAAGTATTCACTCTTCCAGAATACCTCCACGAG
TCGACCATCTCCTCTTTAGACGAGATAATCTCCCCTACAACCCTCATTCCTGACTTTGAC
CAGTTGGCTGGTCAGTTCGACCTTCCGAACCTTCTCAGCAACAAAGTATCCTGGTGGCTC
ACTTCGCCCAACTCGCAAGACCCGGACAGCGCAGTACACGCGATGACGAACGGGAATATC
CACAACACGATAGCGACCACCAGCGTCACTAGAAAGCCAAGCAAACCGCTCACGAGCAAG
AAGTCGTCGTCGAGTGACAGTGACCTAACCGCCATGACCCCCATATCCCCGGTTTCCCCG
TCCACCCCGTCGCTATCAAGTCAGCAAGACGCGCTCACTAATGGAGCAATTACCGGCAGT
AACGGAAGCCTAAATAGCGCCGGTAGCGGCAAAATGAACTTTCCCGGCAAAGTGACGACG
CTAAACGACCACATGCCGGTTGCTATAGTAAACGGAGTCTAATCTCGCGGTGCAATCGAT
ACGAGGGAAGTTGTAGCTTCCAGGAGCAAGTGTTGGCCGAGAGACGTGGTCGGCATGTTA
CAGCATATCATACTAGCGACATTTATACATATCTATTGTAATGCAGGATAACTTGAACAA
ATCCGTGTCTGCCATGATTCTGTACATTTGTGCCAATTTAACAAACTGTATAACTGATTA
TCGCTGAAAGGG
| Gene3D |
Znf_RING/FYVE/PHD (IPR013083) - T[8-95] 2.9E-16 |
| SMART |
Znf_RING (IPR001841) - T[19-59] 3.4E-7 |
| Pfam |
Znf-RING_LisH (IPR027370) - T[19-57] 2.0E-8 |
| ProSiteProfiles |
Znf_RING (IPR001841) - T[19-60] 13.138 |
| ProSitePatterns |
Znf_RING_CS (IPR017907) - T[34-43] . |
| SMART |
Znf_B-box (IPR000315) - T[109-150] 7.5E-6 |
| Pfam |
Znf_B-box (IPR000315) - T[113-150] 5.2E-8 |
| CDD |
Znf_B-box (IPR000315) - T[114-150] 2.62074E-10 |
| ProSiteProfiles |
Znf_B-box (IPR000315) - T[114-150] 10.466 |
| Gene3D |
6-blade_b-propeller_TolB-like (IPR011042) - T[432-628] 2.0E-43 - T[629-721] 1.6E-19 |
| ProSiteProfiles |
NHL_repeat_subgr (IPR013017) - T[444-485] 7.093 - T[530-573] 11.39 - T[577-620] 10.835 - T[624-667] 15.07 - T[668-711] 5.161 |
| Pfam |
NHL_repeat (IPR001258) - T[543-570] 8.8E-6 - T[637-664] 5.9E-7 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| LIN41_HUMAN | 22.294 % | 142 | 9.74E-35 |
| TRIM2_HUMAN | 27.853 % | 304 | 2.58E-91 |
| TRIM3_HUMAN | 27.507 % | 287 | 4.13E-85 |