Aniseed - Transcript Card

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R431.446118-449104.09085.t

Possible name(s)

RPL10A; RSL1D1

Gene model

Cisavi.CG.ENS81.R431.446118-449104

Location

R431 [446,593 / 449,102]

Sequences

Amino acid sequence

Length: 227

>Cisavi.CG.ENS81.R431.446118-449104.09085.p
FVLVINFLRLINSKVSRDALYECIENVLKSSKEKQRKFLESVELQISLKNYDPQKDKRFS
GTVKLPNLPRNKFRVCILGDAAHCDEANANTIPCMDVEALKKFNKDKKLVKKLAKKYDAF
LASESLIKQIPRLLGPGLNKAGKFPTLVTHQESLVSKIHDVKCTIKFQMKKVLCLAVAIG
NVGMTEDQLVQNLNLAINFLVSLLKKNWQNVRSLYVKSTMGRPQRLY

Nucleotide sequence

Length: 718

>Cisavi.CG.ENS81.R431.446118-449104.09085.t
TTTGTCCTAGTCATTAATTTTTTACGTTTGATTAACAGCAAGGTATCACGTGACGCTCTG
TACGAGTGCATCGAGAATGTTCTCAAAAGTTCGAAGGAAAAGCAGAGGAAGTTTCTCGAG
TCGGTTGAACTGCAAATCTCCCTGAAGAACTACGATCCACAGAAGGACAAACGTTTCTCG
GGCACAGTCAAGTTGCCAAATCTCCCCCGCAACAAATTCCGAGTTTGCATACTTGGAGAT
GCTGCTCATTGCGATGAGGCAAACGCCAACACGATCCCATGTATGGACGTGGAGGCTTTG
AAGAAGTTCAACAAGGACAAGAAACTTGTCAAAAAACTTGCGAAGAAATACGATGCTTTC
CTTGCATCCGAGTCTCTCATCAAACAAATCCCAAGGTTATTGGGGCCGGGACTGAACAAA
GCCGGAAAGTTTCCAACCCTCGTTACCCACCAGGAATCTCTGGTTTCCAAGATCCATGAT
GTGAAATGCACCATCAAGTTTCAGATGAAGAAGGTTCTGTGTTTGGCCGTTGCCATTGGG
AACGTGGGGATGACAGAGGACCAACTTGTTCAAAATCTCAACCTCGCAATCAACTTCTTG
GTATCGCTTCTGAAGAAGAATTGGCAAAACGTTCGGTCGCTCTACGTCAAGAGCACCATG
GGACGTCCACAGCGATTGTATTAAATACATAACGCCAATAAAATATGTTCTAATCAAT

InterProScan

PIRSF	Ribosomal_L1 (IPR002143) - T[7-227] 2.9E-49
SUPERFAMILY	Ribosomal_L1-like (IPR023674) - T[13-227] 1.57E-68
CDD	Ribosomal_L1/biogenesis (IPR028364) - T[20-226] 3.00625E-66
Pfam	Ribosomal_L1/biogenesis (IPR028364) - T[32-221] 1.1E-44
Gene3D	Ribosomal_L1_3-a/b-sand (IPR016095) - T[73-162] 8.8E-67
ProSitePatterns	Ribosomal_L1_CS (IPR023673) - T[127-146] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RL10A_HUMAN	75.576 %	314	5.09E-110