- Transcript 'Haaura.CG.MTP2014.S9...' >
- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'KH2012:KH.C2.199.v1....' >
- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'Cisavi.CG.ENS81.R4.2...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R4.275069-277842.08618.t
Possible name(s)
SQSTM1
Gene model
Location
R4 [275,068 / 277,842]
Amino acid sequence
Length: 326
>Cisavi.CG.ENS81.R4.275069-277842.08618.p
MSVQYKAFLYADDPSRAKEIRRFAIDVDVSSSYEYLRRKVASVFPNLGEQNFALQWRDTE
GDLIWLNSDEELLQALGEKNEAVFRLYIKESATSQTSNERPDFHQFQGQFQGCPAWGAGK
RHGRHPRCPPWAPPFFQAPGFYAAGQFGHCGGASQQKPTQKDEKKSSSAGDNEEPNTSQS
QTQNNGDEYLRNVGKFVSDFLHPFGIDVDVDVKTNETSGDKSTSQDTSAEAKATGSDKKS
SDSSGSEDMEWTFVKKDNKSPKKDDSTAEEKPAEDDENGRLQNALDKLLAMGFNNEGGWL
ANLLQSCNYDISRALDKMQPARGSKD
Nucleotide sequence
Length: 1,747
>Cisavi.CG.ENS81.R4.275069-277842.08618.t
TAGTTGTGTGAGCTATTCGTGGTGAAATTTTCAATTTGACAAGTCACGTCGATGAATAAA
TGGCGTAAGAATAGTGGAAACTTCTAGAAGAAATACAGAACATATAAAGCCACTCCGATA
ATCGGTCTACACATATCACCGACTATTAAGAGAAGATTTAAAGTGTACCTGTCAACTAGT
TAGAATCAAGAACGATAAAATGTCAGTACAATACAAAGCATTTCTGTACGCTGATGATCC
CAGTCGTGCCAAGGAAATCCGAAGATTTGCGATCGATGTTGACGTTTCGTCTAGTTACGA
ATATTTGCGCAGAAAGGTTGCATCAGTCTTTCCAAACCTTGGCGAGCAAAATTTTGCCCT
CCAGTGGCGAGATACAGAGGGTGACCTCATTTGGTTAAATTCAGATGAGGAACTGCTGCA
AGCACTCGGGGAAAAGAATGAAGCTGTATTTAGATTGTATATCAAGGAAAGTGCGACGTC
CCAAACATCAAATGAGCGACCAGACTTTCACCAATTTCAGGGACAATTTCAGGGTTGTCC
AGCGTGGGGAGCTGGCAAACGACATGGCAGACACCCCAGATGCCCCCCTTGGGCCCCACC
ATTCTTCCAGGCCCCCGGTTTCTATGCAGCTGGTCAGTTTGGCCACTGTGGTGGTGCTTC
TCAACAGAAACCAACACAAAAAGATGAAAAGAAATCTTCTTCAGCAGGGGATAATGAAGA
GCCAAATACCAGTCAATCGCAAACCCAAAACAATGGCGACGAATACTTGAGGAATGTGGG
AAAATTTGTGTCAGATTTCCTGCATCCATTTGGTATAGACGTGGACGTCGATGTGAAAAC
AAACGAAACTTCGGGAGACAAATCAACATCACAAGATACATCTGCTGAAGCCAAGGCAAC
TGGCTCTGACAAAAAGAGCTCAGACTCAAGTGGGAGTGAAGATATGGAATGGACATTTGT
TAAAAAAGATAATAAATCACCAAAAAAAGACGACTCGACAGCTGAAGAAAAGCCAGCTGA
GGATGATGAAAATGGGAGACTCCAGAATGCTCTTGACAAATTGCTTGCCATGGGGTTCAA
CAATGAGGGCGGTTGGTTGGCCAATCTTCTTCAATCCTGCAACTATGACATCAGCCGAGC
CCTTGATAAAATGCAACCAGCTCGTGGCAGTAAAGATTAGACCAGAAAACTGACGGTTTT
ATACATAGAACCTACCGTATGCGGATATTTTTGCCCACTCTTGATTTACTTCTTGTCCAT
TTCTTTTAACATAACAAGTGTAAATATACTAGTCAGTCATAAAAATAGAATACATTTTTA
TCTTTATAAAAATTGATGTATGGTATTGTGGATGTAATTACCACCATAATGTTTTTTCAT
GTGGGCTGTTACTATATAATCTGTGTAACTAGTAATTCCATGCATGGTGTTTTAATGTGT
GCACTTTTTAATACACTTAAATAACTCAAAACAGTTGATGTAAAAATAAACATCAAGCTC
ACATTCCTTGGTCGTTTTATCATGATAATGTATATACCCACTCTGCTGTAATTAACCCTT
TGTTTAAAATTGAGTGTTTAAAATTTTTTAAAGTTGTTTTGACTTCTCTCTTAACTTTCG
TTCCATGGTTTTCTCTTTTATTTGGTCTTTTTTAACCAACAAAATTTAATAAGATGAGTA
ATATTTTATTCACCTTTTCTTTTAGAATTTCTCTATTATTTTCTACTTTCTCTGTAATCA
TGTATAT
| ProSiteProfiles |
PB1_dom (IPR000270) - T[2-91] 18.434 |
| SMART |
PB1_dom (IPR000270) - T[2-91] 2.9E-10 |
| Pfam |
PB1_dom (IPR000270) - T[19-89] 7.2E-12 |
| ProSiteProfiles |
UBA (IPR015940) - T[274-321] 8.86 |
| Pfam |
SQSTM_UBA (IPR033741) - T[276-319] 9.9E-12 |
| SUPERFAMILY |
UBA-like_sf (IPR009060) - T[277-321] 1.45E-13 |
| CDD |
SQSTM_UBA (IPR033741) - T[280-319] 3.22375E-17 |
| Protein Name | Identity | Bit Score | e-value |
|---|