Aniseed - Transcript Card

Sequences

Amino acid sequence

Length: 550

>Cisavi.CG.ENS81.R417.42473-63039.01907.p
MPSSAHMRWTLLVVIRSSKPTWCSPVCERTGQLLQEEWLKLNARQFGSASNNSAPSQMNC
NYNYQNNTAAWDRDYNELDECMDVNECLQNNGGCVSPATCVDLPGTYECVCPAEPADYVL
VDGFTCERDECADPDQGGCSHNCTNTVGSYICYCPNGMTLIEDGLTCNVDECQDGNAGCQ
QTCVNTLDGYRCECQAGSTLNADLHSCDDINECLVANGGCSHNCTNMAPGYECSCPENMI
LNSDGFTCRENPCFTNNGGCAQMCTVLEVGFECSCSTGYDLLEDGSCQDINECAVNNAGC
QYNCTNTDGSFVCSCPVGQGLHIDGRTCGRACYHCNGASTNEECNAMPIQICTDDAQSCE
NEIRINNGVKQIFKGCKQTQACNNNYIQNPRDAFQPSQCNGNLGNDVCRCCCSGHLCNFN
EKPCETAQPCTIKKADVAIVVDSSSSVKFNNFQKMKSFTNSLFQSFKLGEDRVHAALVRY
NRRVDERFGFADTNTKAEVQDAVDAMPYRGGGTKTGQAIQHVIDNTMKTANGARADAQKI
VIVITDGRSQ

Nucleotide sequence

Length: 2,036

>Cisavi.CG.ENS81.R417.42473-63039.01907.t
GAAACCAACGAATGCGATAACAACAACGGTGGGTGCGAACAGATCTGCGAAAACACCCCA
GGCTCCTACAACTGCGCCTGCCCACCCGGTTTCGGTCTCCGATCTGACGGAAAGACGTGC
GGAATCCAGTGTTATTCTTGCCAGAATGTCCTTTCCAACAGCGACTGCAGTGACCTTGTT
GCTTGCGCGGTGTCCCAAGATGCTTGCTTCACAACCATGAGAACCAGAGACAACGTCACT
TCCATCAGCAAAGGATGCCAACAGACGCAAGCTTGCATCAACAACATGATCCAGAACAAC
CGCAACATGGGCGAGGGACCATCCCAGTGCAACGGAAACCTGCAGAACTCGAAATGCGAA
TGTTGCTGCACCGAATCCGCGTGTAATGCCGAGCTCTGCCCATATGAGATGGACATTGCT
GGTTGTGATTCGTTCGTCAAAGCCGACGTGGTGTTCACCGGTATGCGAGAGGACGGGACA
ATTGCTCCAGGAGGAATGGCTAAAGTTGAATGCCCGCCAGTTTGGTTCCGCGTCCAACAA
CAGCGCTCCAAGCCAGATGAACTGCAACTACAACTACCAGAACAACACAGCAGCCTGGGA
CCGAGATTACAATGAGCTTGATGAATGCATGGATGTGAACGAATGCCTGCAAAACAACGG
GGGATGTGTGAGTCCAGCCACATGTGTTGACCTCCCAGGAACATACGAATGTGTCTGCCC
AGCGGAACCAGCTGATTATGTCCTTGTTGATGGCTTCACATGTGAAAGAGACGAGTGTGC
AGACCCAGACCAAGGGGGATGTTCTCACAATTGCACGAACACTGTTGGAAGTTACATCTG
CTACTGTCCCAACGGGATGACTCTCATAGAAGATGGACTCACCTGCAACGTCGACGAATG
CCAGGACGGTAACGCTGGATGCCAACAAACATGCGTTAACACATTGGACGGGTACAGATG
CGAATGTCAGGCCGGTTCGACCTTGAACGCTGATCTCCACTCCTGTGACGATATCAACGA
ATGCCTTGTCGCCAACGGTGGGTGTTCACACAACTGCACTAACATGGCTCCAGGATATGA
ATGCTCCTGTCCCGAGAACATGATCTTGAACTCGGACGGATTCACATGCAGAGAGAACCC
ATGCTTCACCAACAACGGGGGATGCGCTCAAATGTGCACCGTCCTGGAGGTCGGATTCGA
ATGCTCATGCTCAACTGGATACGACCTTCTCGAGGACGGCAGTTGCCAAGACATCAACGA
ATGCGCTGTGAACAACGCTGGATGCCAATACAATTGCACCAACACTGATGGAAGCTTTGT
GTGCTCGTGCCCCGTCGGACAAGGTCTTCATATTGATGGGAGAACATGCGGTCGAGCTTG
CTACCACTGCAACGGAGCCAGCACAAACGAAGAATGCAACGCAATGCCGATCCAAATCTG
CACTGACGACGCACAATCGTGTGAGAATGAGATCCGCATCAACAATGGAGTGAAGCAAAT
CTTCAAAGGATGCAAACAGACCCAAGCTTGCAACAACAACTACATTCAGAACCCACGAGA
CGCTTTCCAACCATCCCAATGCAACGGCAACCTCGGAAATGACGTCTGCCGATGTTGCTG
CTCAGGACATCTCTGCAACTTCAACGAGAAACCATGCGAAACCGCCCAACCATGCACTAT
CAAGAAGGCCGATGTCGCTATCGTCGTCGATTCTTCGAGCTCAGTCAAATTCAACAACTT
CCAAAAGATGAAATCGTTCACGAACAGTTTGTTCCAATCGTTCAAGCTCGGAGAAGATCG
CGTCCACGCCGCTCTTGTCAGATACAACCGACGAGTCGACGAGCGATTCGGATTCGCCGA
CACCAACACCAAGGCGGAAGTGCAAGACGCGGTGGACGCGATGCCATACCGCGGAGGGGG
TACCAAGACTGGTCAAGCTATTCAACACGTCATCGATAATACAATGAAAACCGCCAACGG
CGCTAGAGCGGACGCACAGAAGATTGTCATCGTCATCACCGACGGTAGATCTCAGG

InterProScan

ProSiteProfiles	EGF-like_dom (IPR000742) - T[83-127] 10.592 - T[168-208] 9.193 - T[289-329] 7.267
Pfam	EGF-like_Ca-bd_dom (IPR001881) - T[83-113] 1.1E-4 - T[169-207] 4.0E-5 - T[289-320] 2.3E-5
SMART	EGF-like_Ca-bd_dom (IPR001881) - T[83-127] 1.0E-5 - T[129-165] 0.003 - T[168-208] 1.3E-7 - T[209-249] 6.2E-5 - T[289-329] 2.0E-5
SMART	EGF-like_dom (IPR000742) - T[86-127] 0.15 - T[130-168] 4.1E-4 - T[171-208] 3.7E-4 - T[212-249] 0.0052 - T[252-288] 0.61 - T[292-329] 0.31
ProSitePatterns	EGF-type_Asp/Asn_hydroxyl_site (IPR000152) - T[100-111] . - T[183-194] . - T[304-315] .
SUPERFAMILY	Growth_fac_rcpt_cys_sf (IPR009030) - T[122-253] 4.47E-16
ProSitePatterns	EGF_Ca-bd_CS (IPR018097) - T[289-313] .
SUPERFAMILY	vWFA_dom_sf (IPR036465) - T[397-550] 5.82E-36
Gene3D	vWFA_dom_sf (IPR036465) - T[433-550] 1.4E-33
SMART	VWF_A (IPR002035) - T[434-550] 1.1E-8
Pfam	VWF_A (IPR002035) - T[436-550] 4.1E-30
ProSiteProfiles	VWF_A (IPR002035) - T[436-550] 22.809