Aniseed - Transcript Card

Sequences

Amino acid sequence

Length: 836

>Cisavi.CG.ENS81.R417.42473-63039.01904.p
MDLVVLLDSSSSVKAPNFQILRQFLSNLTLNFNVGPDAMQLAVTRYNRRIDDRFDLNDYL
TKNDLLRQISRIPYNGGGTFTGRGLTYLADNKFTAAAGRRPGVAAIALVITDGRANDPVA
APAARLHEMATVIALGIKGAVEAEINVIASPSPTNEYAHVISDFSDLPRIFGVISAAACI
VDTNECLLDNAGCDQLCVNSNVGFYCECEPGYTLGADLASCIDIDECANNNGACEVFCNN
TAGSYECSCPEGQGLRNDGRSCDIDECANNNGGCSHTCTNTNGSYVCSCPDSNPSNRSDG
HTCDFDECSANNGGCSGECTNTIGSFYCSCPEGESLLADGVSGLTCDDFNECLDENGGCS
HDCVDTSPGYRCECPTGMILGPDMETCGKSLDSCANQVAPFVCSHNCNNVIGGSYQCTCE
DGYVLEADGHNCTETNECDNNNGGCEQICENTPGSYNCACPPGFGLRSDGKTCGIQDECA
DPDQGGCSHNCTNTVGSYICYCPNGMTLIEDGLTCNVDECQDGNAGCQQTCVNTLDGYRC
ECQAGSTLNADLHSCDDINECLVANGGCSHNCTNMAPGYECSCPENMILNSDGFTCRFEH
QNPCFTNNGGCAQMCTVLEVGFECSCSTGYDLLEDGSCQDINECAVNNAGCQYNCTNTDG
SFVCSCPVGQGLHIDGRTCGKNRADVAIVVDSSSSVKFNNFQKMKSFTNSLFQSFKLGED
RVHAALVRYNRRVDERFGFADTNTKAEVQDAVDAMPYRGGGTKTGQAIQHVIDNTMKTAN
GARADAQKIVIVITDGRSQDDVLTPSIALRDSGAITFGIGIGAGVLENQIQEIAGD

Nucleotide sequence

Length: 3,001

>Cisavi.CG.ENS81.R417.42473-63039.01904.t
ATGGATCTTGTTGTTTTGCTCGATTCAAGCTCGTCTGTGAAGGCTCCAAACTTCCAGATC
TTGAGACAATTTCTATCCAACCTCACCCTCAATTTCAATGTCGGTCCCGACGCAATGCAA
CTCGCCGTGACGCGGTACAACCGTCGCATCGACGACCGATTCGACCTCAATGATTACCTC
ACAAAGAATGATCTGTTGAGGCAAATCTCAAGAATCCCGTACAACGGTGGAGGAACATTT
ACCGGGCGCGGCCTCACTTATCTGGCGGACAATAAGTTCACAGCAGCGGCTGGCAGACGG
CCAGGTGTGGCCGCCATTGCGCTGGTAATTACTGACGGAAGAGCAAATGACCCAGTTGCC
GCACCCGCCGCCAGACTGCACGAGATGGCGACAGTTATAGCGCTCGGGATCAAAGGGGCG
GTGGAAGCTGAGATCAACGTGATCGCCTCTCCAAGCCCCACCAACGAGTATGCCCATGTT
ATCAGCGATTTCAGCGATCTTCCCCGTATATTCGGGGTGATATCCGCGGCAGCTTGTATT
GTTGACACCAACGAATGTCTTCTGGATAACGCCGGTTGCGATCAACTTTGCGTCAACTCC
AACGTCGGTTTCTACTGCGAATGCGAGCCAGGCTACACACTTGGCGCAGATTTGGCTTCT
TGCATCGACATCGACGAATGCGCGAACAACAATGGCGCTTGTGAGGTCTTCTGCAACAAC
ACCGCTGGTTCATACGAATGTTCGTGCCCGGAAGGCCAGGGGCTCAGAAACGATGGACGA
TCATGTGACATCGACGAGTGCGCGAACAACAATGGTGGATGCTCCCATACATGCACCAAC
ACCAACGGCTCATACGTGTGCTCGTGTCCCGATAGCAACCCATCGAACCGTTCGGACGGC
CACACGTGCGACTTCGATGAATGCAGTGCGAACAACGGTGGATGCAGTGGGGAATGCACC
AACACAATCGGATCTTTCTATTGTTCCTGTCCTGAGGGAGAATCTCTACTCGCTGATGGA
GTCTCGGGATTAACTTGCGATGATTTCAACGAATGTTTGGACGAAAACGGCGGATGCAGT
CACGACTGCGTTGACACATCTCCAGGATATCGCTGTGAATGCCCCACAGGCATGATCCTC
GGCCCGGATATGGAGACTTGTGGTAAGTCACTCGACAGTTGCGCGAACCAGGTCGCCCCA
TTCGTGTGCAGCCACAACTGCAACAACGTGATTGGAGGATCGTACCAATGTACTTGCGAG
GATGGATACGTGCTCGAGGCTGATGGACACAATTGTACCGAAACCAACGAATGCGATAAC
AACAACGGTGGGTGCGAACAGATCTGCGAAAACACCCCAGGCTCCTACAACTGCGCCTGC
CCACCCGGTTTCGGTCTCCGATCTGACGGAAAGACGTGCGGAATCCAAGACGAGTGTGCA
GACCCAGACCAAGGGGGATGTTCTCACAATTGCACGAACACTGTTGGAAGTTACATCTGC
TACTGTCCCAACGGGATGACTCTCATAGAAGATGGACTCACCTGCAACGTCGACGAATGC
CAGGACGGTAACGCTGGATGCCAACAAACATGCGTTAACACATTGGACGGGTACAGATGC
GAATGTCAGGCCGGTTCGACCTTGAACGCTGATCTCCACTCCTGTGACGATATCAACGAA
TGCCTTGTCGCCAACGGTGGGTGTTCACACAACTGCACTAACATGGCTCCAGGATATGAA
TGCTCCTGTCCCGAGAACATGATCTTGAACTCGGACGGATTCACATGCAGGTTCGAACAT
CAGAACCCATGCTTCACCAACAACGGGGGATGCGCTCAAATGTGCACCGTCCTGGAGGTC
GGATTCGAATGCTCATGCTCAACTGGATACGACCTTCTCGAGGACGGCAGTTGCCAAGAC
ATCAACGAATGCGCTGTGAACAACGCTGGATGCCAATACAATTGCACCAACACTGATGGA
AGCTTTGTGTGCTCGTGCCCCGTCGGACAAGGTCTTCATATTGATGGGAGAACATGCGGT
AAGAATCGGGCCGATGTCGCTATCGTCGTCGATTCTTCGAGCTCAGTCAAATTCAACAAC
TTCCAAAAGATGAAATCGTTCACGAACAGTTTGTTCCAATCGTTCAAGCTCGGAGAAGAT
CGCGTCCACGCCGCTCTTGTCAGATACAACCGACGAGTCGACGAGCGATTCGGATTCGCC
GACACCAACACCAAGGCGGAAGTGCAAGACGCGGTGGACGCGATGCCATACCGCGGAGGG
GGTACCAAGACTGGTCAAGCTATTCAACACGTCATCGATAATACAATGAAAACCGCCAAC
GGCGCTAGAGCGGACGCACAGAAGATTGTCATCGTCATCACCGACGGTAGATCTCAGGAC
GACGTTCTCACCCCAAGTATCGCCCTTCGCGACTCCGGCGCTATCACCTTCGGCATCGGC
ATCGGGGCTGGGGTGCTCGAGAACCAGATCCAAGAGATCGCTGGAGACACGTCACGTGCT
TTCATTGTTGACACCTTCGATCAGCTGAGCGGAGTAATATTGAACCACGTGAAGCAGGCT
GTGTGTTATGACGTCAACGAGTGTGACACGAACAATGGCGGTTGTTCCGACACATGCGTC
AACACCCAAGGCTCCTTCCACTGCACTTGTCCCGAGAACATGATCTTGGATTCGGACCTC
GCTACCTGTATCTCCAACACCACTGGACAACGCGCCGCCTTCGATGAGTGCTCGGTGGAC
AATGGGGGTTGCAGCGATGGTTGTGTCGACACTTTGGAAGGTTTCAACTGTACATGCGCG
CCAGGATTCGTACTCAAAGCCGACTTGCTTACTTGTGAAGATGCCGACGAATGCTTGGAC
GCCATGTGTTCCCACACATGCGTCAACACGCCAGGCAGCTACTTCTGCGAGTGCCCCAAG
GAATACCAGATGTCCGAGGACCGTATCACGTGCACACTTCGCGCTTCCGAAGCCGATTGT
G

InterProScan

SMART	VWF_A (IPR002035) - T[1-179] 7.2E-31 - T[683-834] 2.1E-31
SUPERFAMILY	vWFA_dom_sf (IPR036465) - T[1-179] 3.97E-40 - T[662-836] 2.97E-44
Gene3D	vWFA_dom_sf (IPR036465) - T[1-185] 1.4E-41 - T[682-836] 3.9E-43
Pfam	VWF_A (IPR002035) - T[2-171] 7.7E-31 - T[685-835] 9.3E-38
ProSiteProfiles	VWF_A (IPR002035) - T[2-174] 25.521 - T[685-836] 27.265
SUPERFAMILY	Growth_fac_rcpt_cys_sf (IPR009030) - T[179-297] 8.95E-12 - T[265-395] 7.06E-11 - T[389-516] 2.83E-14 - T[519-604] 1.73E-10 - T[601-680] 7.85E-8
SMART	EGF-like_Ca-bd_dom (IPR001881) - T[182-222] 3.7E-6 - T[223-260] 0.0017 - T[263-301] 0.0031 - T[304-347] 1.8E-6 - T[348-388] 4.5E-4 - T[390-433] 0.0041 - T[434-474] 6.1E-6 - T[477-513] 0.003 - T[516-556] 1.3E-7 - T[557-597] 6.2E-5 - T[600-639] 0.78 - T[640-680] 2.0E-5
SMART	EGF-like_dom (IPR000742) - T[185-222] 6.0E-5 - T[226-263] 0.33 - T[266-304] 0.7 - T[307-347] 0.019 - T[351-388] 4.5E-4 - T[393-433] 0.011 - T[437-474] 0.0013 - T[478-516] 4.1E-4 - T[519-556] 3.7E-4 - T[560-597] 0.0052 - T[603-639] 0.61 - T[643-680] 0.31
ProSitePatterns	EGF-like_CS (IPR013032) - T[206-221] . - T[417-432] . - T[458-473] .
ProSitePatterns	EGF_Ca-bd_CS (IPR018097) - T[223-247] . - T[434-458] . - T[640-664] .
Pfam	EGF-like_Ca-bd_dom (IPR001881) - T[263-303] 1.4E-4 - T[304-333] 1.4E-5 - T[392-432] 0.0017 - T[477-515] 5.3E-4 - T[517-555] 6.6E-5 - T[640-671] 3.8E-5
ProSiteProfiles	EGF-like_dom (IPR000742) - T[263-304] 9.04 - T[348-388] 6.511 - T[390-433] 6.934 - T[434-474] 7.728 - T[516-556] 9.193 - T[640-680] 7.267
ProSitePatterns	EGF-type_Asp/Asn_hydroxyl_site (IPR000152) - T[278-289] . - T[363-374] . - T[449-460] . - T[531-542] . - T[655-666] .