Aniseed - Transcript Card

Sequences

Amino acid sequence

Length: 563

>Cisavi.CG.ENS81.R417.42473-63039.01903.p
MAKVECPPVGSASNNSAPSQMNCNYNYQNNTAAWDRDYNELDECMDVNECLQNNGGCVSP
ATCVDLPGTYECVCPAEPADYVLVDGFTCERDECADPDQGGCSHNCTNTVGSYICYCPNG
MTLIEDGLTCNVDECQDGNAGCQQTCVNTLDGYRCECQAGSTLNADLHSCDDINECLVAN
GGCSHNCTNMAPGYECSCPENMILNSDGFTCRENPCFTNNGGCAQMCTVLEVGFECSCST
GYDLLEDGSCQDINECAVNNAGCQYNCTKTGQAIQHVIDNTMKTANGARADAQKIVIVIT
DGRSQDDVLTPSIALRDSGAITFGIGIGAGVLENQIQEIAGDTSRAFIVDTFDQLSGVIL
NHVKQAVCYDVNECDTNNGGCSDTCVNTQGSFHCTCPENMILDSDLATCISNTTGQRAAF
DECSVDNGGCSDGCVDTLEGFNCTCAPGFVLKADLLTCEDADECLDAMCSHTCVNTPGSY
FCECPKEYQMSEDRITCTLRASEADCDAGFMPKGHSCTQQNNEALAYVPAEEACAAAGGR
LMKIADSGVRQIMSRNYQGANFV

Nucleotide sequence

Length: 1,714

>Cisavi.CG.ENS81.R417.42473-63039.01903.t
ACGGGACAATTGCTCCAGGAGGAATGGCTAAAGTTGAATGCCCGCCAGTTGGTTCCGCGT
CCAACAACAGCGCTCCAAGCCAGATGAACTGCAACTACAACTACCAGAACAACACAGCAG
CCTGGGACCGAGATTACAATGAGCTTGATGAATGCATGGATGTGAACGAATGCCTGCAAA
ACAACGGGGGATGTGTGAGTCCAGCCACATGTGTTGACCTCCCAGGAACATACGAATGTG
TCTGCCCAGCGGAACCAGCTGATTATGTCCTTGTTGATGGCTTCACATGTGAAAGAGACG
AGTGTGCAGACCCAGACCAAGGGGGATGTTCTCACAATTGCACGAACACTGTTGGAAGTT
ACATCTGCTACTGTCCCAACGGGATGACTCTCATAGAAGATGGACTCACCTGCAACGTCG
ACGAATGCCAGGACGGTAACGCTGGATGCCAACAAACATGCGTTAACACATTGGACGGGT
ACAGATGCGAATGTCAGGCCGGTTCGACCTTGAACGCTGATCTCCACTCCTGTGACGATA
TCAACGAATGCCTTGTCGCCAACGGTGGGTGTTCACACAACTGCACTAACATGGCTCCAG
GATATGAATGCTCCTGTCCCGAGAACATGATCTTGAACTCGGACGGATTCACATGCAGAG
AGAACCCATGCTTCACCAACAACGGGGGATGCGCTCAAATGTGCACCGTCCTGGAGGTCG
GATTCGAATGCTCATGCTCAACTGGATACGACCTTCTCGAGGACGGCAGTTGCCAAGACA
TCAACGAATGCGCTGTGAACAACGCTGGATGCCAATACAATTGCACCAAGACTGGTCAAG
CTATTCAACACGTCATCGATAATACAATGAAAACCGCCAACGGCGCTAGAGCGGACGCAC
AGAAGATTGTCATCGTCATCACCGACGGTAGATCTCAGGACGACGTTCTCACCCCAAGTA
TCGCCCTTCGCGACTCCGGCGCTATCACCTTCGGCATCGGCATCGGGGCTGGGGTGCTCG
AGAACCAGATCCAAGAGATCGCTGGAGACACGTCACGTGCTTTCATTGTTGACACCTTCG
ATCAGCTGAGCGGAGTAATATTGAACCACGTGAAGCAGGCTGTGTGTTATGACGTCAACG
AGTGTGACACGAACAATGGCGGTTGTTCCGACACATGCGTCAACACCCAAGGCTCCTTCC
ACTGCACTTGTCCCGAGAACATGATCTTGGATTCGGACCTCGCTACCTGTATCTCCAACA
CCACTGGACAACGCGCCGCCTTCGATGAGTGCTCGGTGGACAATGGGGGTTGCAGCGATG
GTTGTGTCGACACTTTGGAAGGTTTCAACTGTACATGCGCGCCAGGATTCGTACTCAAAG
CCGACTTGCTTACTTGTGAAGATGCCGACGAATGCTTGGACGCCATGTGTTCCCACACAT
GCGTCAACACGCCAGGCAGCTACTTCTGCGAGTGCCCCAAGGAATACCAGATGTCCGAGG
ACCGTATCACGTGCACACTTCGCGCTTCCGAAGCCGATTGTGACGCAGGGTTCATGCCGA
AAGGTCACAGCTGCACGCAACAGAACAACGAAGCGTTAGCGTACGTCCCCGCCGAGGAAG
CTTGCGCCGCCGCTGGAGGGCGCCTCATGAAGATCGCTGATTCCGGAGTCCGACAAATCA
TGTCGAGGAACTACCAAGGAGCTAACTTCGTCGG

InterProScan

ProSitePatterns	EGF_Ca-bd_CS (IPR018097) - T[40-72] . - T[131-155] . - T[172-196] . - T[460-482] .
Pfam	EGF-like_Ca-bd_dom (IPR001881) - T[46-76] 1.2E-4 - T[132-170] 4.1E-5
SMART	EGF-like_Ca-bd_dom (IPR001881) - T[46-90] 1.0E-5 - T[92-128] 0.003 - T[131-171] 1.3E-7 - T[172-212] 6.2E-5 - T[370-410] 1.1E-7 - T[419-459] 9.6E-4 - T[460-498] 3.7E-9
ProSiteProfiles	EGF-like_dom (IPR000742) - T[46-90] 10.592 - T[131-171] 9.193 - T[460-498] 10.032
SMART	EGF-like_dom (IPR000742) - T[49-90] 0.15 - T[93-131] 4.1E-4 - T[134-171] 3.7E-4 - T[175-212] 0.0052 - T[215-251] 0.61 - T[373-410] 0.0012 - T[422-459] 8.4E-4 - T[463-498] 0.0011
ProSitePatterns	EGF-type_Asp/Asn_hydroxyl_site (IPR000152) - T[63-74] . - T[146-157] . - T[473-484] .
SUPERFAMILY	Growth_fac_rcpt_cys_sf (IPR009030) - T[85-216] 6.43E-16 - T[367-499] 1.24E-14
Gene3D	vWFA_dom_sf (IPR036465) - T[254-367] 1.9E-18
SUPERFAMILY	vWFA_dom_sf (IPR036465) - T[257-362] 8.53E-23
Pfam	VWF_A (IPR002035) - T[257-357] 6.4E-19
ProSiteProfiles	VWF_A (IPR002035) - T[268-363] 15.835
ProSitePatterns	EGF-like_CS (IPR013032) - T[443-458] .