- Transcript 'Cisavi.CG.ENS81.R24....' >
- Transcript 'Cisavi.CG.ENS81.R24....' >
- Transcript 'Mooccu.CG.ELv1_2.S20...' >
- Transcript 'Cisavi.CG.ENS81.R24....' >
- Transcript 'Cisavi.CG.ENS81.R417...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R417.42473-63039.01901.t
Possible name(s)
FBN1; FBN2; MATN2
Gene model
Location
R417 [42,504 / 58,598]
Amino acid sequence
Length: 431
>Cisavi.CG.ENS81.R417.42473-63039.01901.p
MLAEDGHSCPDIDECANNNGACEVFCNNTAGSYECSCPEGQGLRNDGRSCGTLCYTCNRA
TSNEQCMEATVCAPGENSCQTETRLENGVLYISKQCKQTEACVNNFIQNPKTAWSPFQCN
DNPDGISVCRCCCHDSLCNLPGNCTLADDVDIKCDDPSTLETPADMTISCTGSDLGDTCA
LTCPPGYQPVTGASQLVCALTPRSLDGYWNGEIGTCGDIDECANNNGGCSHTCTNTNGSY
VCSCPDSNPCADQLLDLFFILDSSSSVRAANFEKMKDFVGRLVAPLNIGQDKVRVGLMTY
NRKTFKRIDLNEAANNTDFAEQLAAIRYSGRGTKTAQAINFATANCFHESRGRRAGVPLS
VILMTDGRSQDWRQLPVAAARMHELATYFFTLVISQNDIERQSSQGQGEFVVDMKEIRFP
DYDIVVTPYEL
Nucleotide sequence
Length: 2,040
>Cisavi.CG.ENS81.R417.42473-63039.01901.t
CCGAGTGATCGCGATCGGAGTCGGCCCAAATGTCCACGAGGACGAACTCATCACCATAGC
AACAGCTCCAGCATCGGAGAATGTCGTCCTGGTTCCATTCGACCAACTGGTGGACAGAGC
CACCGAACTTATCAATAAGGCTTGTATTGTTGACACCAACGAATGTCTTCTGGATAACGC
CGGTTGCGATCAACTTTGCGTCAACTCCAACGTCGGTTTCTACTGCGAATGCGAGCCAGG
CTACACACTTGGCGCAGATTTGGCTTCTTGCATCGATATCAACGAATGTTTGACGGATAA
CGGTGGATGCAGCGACACTTGCACCAACACTGATGGATCCTACGTCTGCTCCTGCCCGGT
TGGACGCATTCCCGCTGGAGATGCTCACACTTGTGTCGATGACAGTTGTTACCAGAACAC
AGCTTGCGAGCACACCTGCACCAACGTCGTACAAGGAACGTATTTCTGCAGCTGCAACGC
GGGATACATGTTGGCTGAGGATGGTCATTCCTGCCCAGACATCGACGAATGCGCGAACAA
CAATGGCGCTTGTGAGGTCTTCTGCAACAACACCGCTGGTTCATACGAATGTTCGTGCCC
GGAAGGCCAGGGGCTCAGAAACGATGGACGATCATGTGGTACTTTGTGCTACACTTGTAA
CCGCGCCACCTCTAACGAACAATGCATGGAAGCCACTGTATGCGCGCCAGGCGAGAATTC
GTGCCAAACCGAAACCCGACTTGAGAACGGAGTCTTGTACATCTCCAAGCAATGCAAACA
GACCGAGGCTTGCGTGAACAACTTCATCCAGAACCCCAAGACAGCATGGTCTCCCTTCCA
GTGCAACGACAACCCCGACGGAATATCAGTTTGTCGATGTTGTTGCCACGATTCGCTCTG
CAATCTGCCCGGTAACTGCACACTCGCTGATGACGTAGACATCAAGTGTGATGACCCAAG
CACTCTGGAAACCCCGGCGGATATGACGATCTCATGCACAGGAAGTGACCTCGGCGACAC
ATGCGCCCTCACATGCCCACCAGGCTACCAACCAGTGACCGGAGCCAGCCAGTTGGTGTG
CGCCCTCACCCCACGAAGCTTGGACGGATATTGGAATGGAGAGATTGGAACTTGTGGAGA
CATCGACGAGTGCGCGAACAACAATGGTGGATGCTCCCATACATGCACCAACACCAACGG
CTCATACGTGTGCTCGTGTCCCGATAGCAACCCATGTGCGGATCAACTTCTCGATCTCTT
CTTCATCCTGGATTCGTCGTCATCAGTCAGAGCTGCGAACTTCGAGAAAATGAAAGACTT
CGTTGGACGATTGGTCGCCCCACTCAACATCGGCCAAGACAAAGTTCGAGTTGGTCTTAT
GACGTACAACAGGAAAACATTCAAACGAATCGATCTGAACGAGGCAGCAAACAACACTGA
CTTCGCAGAGCAACTCGCTGCTATCCGATACAGCGGACGAGGAACCAAGACCGCACAAGC
CATCAATTTCGCTACAGCGAACTGCTTCCACGAATCACGAGGCCGACGCGCGGGGGTTCC
CCTTTCAGTGATCCTGATGACCGACGGACGATCCCAGGATTGGAGACAACTTCCCGTCGC
TGCCGCTCGAATGCACGAACTCGCTACTTATTTCTTCACCCTCGTCATCTCACAGAACGA
CATTGAACGTCAGAGCAGCCAAGGTCAAGGCGAGTTCGTCGTCGATATGAAGGAGATTCG
ATTCCCCGATTATGACATCGTTGTTACGCCATACGAGCTATAATTTGGATTCGAGAACAT
ATGTTATAGCCAACTTGTACTTATTATAGGCAGTTTGTATGTCCGACTGCATGTATATTA
TAACCTCGCAACATTATATTTCATTTCGATTGTAACTGCCAATTTGACTGCCGCGAGATG
TCGCTATTCATTATTTTAAGTTAAGCTGTGCAAACCCGGATAATTATTACGAAACAAAGC
CGCCTGTAAGAGAATTGGTGTCATTGTACGCAATCATATAACCGAAATGTGCCAAAGTCG
| SMART |
EGF-like_Ca-bd_dom (IPR001881) - T[11-51] 4.2E-4 - T[218-251] 0.0095 |
| ProSitePatterns |
EGF_Ca-bd_CS (IPR018097) - T[11-35] . - T[218-242] . |
| SMART |
EGF-like_dom (IPR000742) - T[14-51] 1.2 - T[221-251] 58.0 |
| ProSiteProfiles |
Sushi_SCR_CCP_dom (IPR000436) - T[152-218] 8.748 |
| CDD |
Sushi_SCR_CCP_dom (IPR000436) - T[154-216] 0.00438756 |
| SUPERFAMILY |
Sushi/SCR/CCP_sf (IPR035976) - T[160-217] 6.57E-7 |
| Pfam |
EGF-like_Ca-bd_dom (IPR001881) - T[218-247] 2.7E-4 |
| SUPERFAMILY |
vWFA_dom_sf (IPR036465) - T[225-394] 7.19E-36 |
| Gene3D |
vWFA_dom_sf (IPR036465) - T[252-418] 1.0E-34 |
| SMART |
VWF_A (IPR002035) - T[254-429] 2.1E-27 |
| ProSiteProfiles |
VWF_A (IPR002035) - T[256-397] 22.07 |
| Pfam |
VWF_A (IPR002035) - T[256-400] 3.9E-32 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| COCA1_HUMAN | 35.664 % | 94.7 | 1.36E-20 |
| MATN2_HUMAN | 25.943 % | 106 | 1.23E-24 |
| MATN4_HUMAN | 29.744 % | 94 | 1.52E-20 |