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  1. Transcript 'Cisavi.CG.ENS81.R41....'

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R41.491637-511410.06062.t

Possible name(s)

ITGA3; ITGA6; ITGA7

Gene model

Cisavi.CG.ENS81.R41.491637-511410

Location

R41 [501,904 / 505,788]

Sequences

Amino acid sequence

Length: 245

>Cisavi.CG.ENS81.R41.491637-511410.06062.p
DNNKYPDLLVGTLSDFVVLLRSRPIITVESRLETSVSSLDLKLPSCSSGTKTYSCFEVTF
CFRYNARHLEYTEELAIHYTVVLDSDLQKERKAARVGFVSPQGPSLLVDTGNIPRSGEWF
CPGNLYQVFFLDLEDRLRPIKIDLEFDLAMGMNGVKREKPDFPVFNMIDDPIMDADYPHK
RSTVVGLANTCGDDGCQSNLRVRGSIPEEVVVGRDGKLLLTLNVTNDGEEAHQAVVSAKL
PQRVY

Nucleotide sequence

Length: 739

>Cisavi.CG.ENS81.R41.491637-511410.06062.t
TCGACAACAACAAGTACCCCGACTTGTTGGTCGGAACATTGTCAGATTTCGTTGTGTTGT
TGCGATCAAGACCGATTATCACCGTTGAGTCACGACTTGAAACAAGTGTCTCAAGTTTGG
ATCTGAAGTTACCCAGCTGTTCATCTGGTACAAAGACCTATTCATGCTTTGAAGTGACGT
TCTGTTTCAGATACAACGCGCGCCACCTAGAGTACACAGAGGAACTCGCCATCCACTACA
CGGTGGTGCTAGACAGCGATTTGCAGAAGGAAAGAAAAGCTGCCCGAGTTGGATTCGTTT
CCCCCCAAGGACCCAGCTTGTTGGTTGACACTGGAAACATTCCCAGATCAGGAGAATGGT
TTTGCCCGGGAAACTTGTATCAAGTCTTTTTCCTGGACCTGGAAGATCGATTGCGACCGA
TTAAGATTGATCTTGAATTCGACCTCGCGATGGGCATGAACGGGGTGAAACGGGAGAAGC
CGGATTTCCCGGTTTTCAACATGATTGACGACCCCATCATGGACGCCGATTACCCCCACA
AGAGGTCGACAGTGGTGGGGCTCGCCAACACATGTGGGGACGACGGTTGTCAGAGCAACC
TACGTGTCCGTGGGTCCATCCCAGAGGAAGTTGTTGTGGGAAGAGACGGGAAACTTCTTC
TCACACTCAATGTAACGAATGATGGGGAGGAAGCTCATCAAGCCGTCGTTTCTGCCAAGC
TCCCGCAGAGAGTTTACTA

InterProScan

PRINTS
Integrin_alpha (IPR000413) - T[16-35] 3.9E-7 - T[135-148] 3.9E-7
Pfam
Integrin_alpha-2 (IPR013649) - T[22-244] 2.9E-32
SUPERFAMILY
Integrin_dom_sf (IPR032695) - T[24-193] 2.04E-18 - T[193-244] 8.37E-8

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
ITA7_HUMAN 30.435 % 89.7 2.06E-20
ITA6_HUMAN 26.374 % 82.4 5.65E-18
ITA3_HUMAN 31.203 % 88.2 6.56E-20