- Transcript 'Haaura.CG.MTP2014.S1...' >
- Transcript 'Moocci.CG.ELv1_2.S63...' >
- Transcript 'Phmamm.CG.MTP2014.S5...' >
- Transcript 'Cisavi.CG.ENS81.R41....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R41.491637-511410.06060.t
Possible name(s)
ITGA3; ITGA6; ITGA7
Gene model
Location
R41 [491,636 / 501,972]
Amino acid sequence
Length: 491
>Cisavi.CG.ENS81.R41.491637-511410.06060.p
NECNRKIISLGLCMFYNTIFDLNRASSTYGYNLEGRLPLFKRGLDPHSTFGFSVALHKLA
VDPGNGLEKSLLVVGSPTAGSITSQTNAVKPGGIYHCPVTTNSEDCTRVKMDLGESTKLN
NKTGQWLGVSLKSQGPGKYLITCAHRHSVRLYTKVHEVEQLCGKCFLLNGTSDNKLTEIR
PEDVDNRFIGSRQPDHGGVEYAQSGTSCTFVGDGEYLMGGPGMWAWTGGMFDVEMADLEA
TEALDLFTSSTAMYETLGCFKNEIDNRKVKCDKDSYLGFSVASSKTLIPDQTTYIAGAPR
GNYTGSVVLYQKVGGLIPMVADTLMGEFIGSSFGFSVEATDLNGDGVDDLLVGAPQYYEY
SNEGKHGGAVYVYISQAGKKLSQTQPQKLTGKLDSFFGYSISPLGDIDQDGFGDFAVGAP
HEKPHGKVYIFRGSADGAVKESQVFDGSNFTDITTDIKGFGVSLSGVVDIDNNKYPDLLV
GTLSDFVVLLR
Nucleotide sequence
Length: 1,476
>Cisavi.CG.ENS81.R41.491637-511410.06060.t
AACGAGTGTAACCGAAAGATTATCTCCTTGGGTTTGTGTATGTTCTATAACACCATTTTT
GACCTTAACAGAGCTTCTTCAACTTATGGATATAATCTTGAAGGAAGGCTACCTCTATTT
AAAAGGGGATTGGACCCACACAGTACGTTTGGATTCAGTGTCGCGCTGCACAAACTCGCA
GTAGATCCAGGAAATGGATTGGAGAAGAGCTTACTAGTGGTTGGAAGCCCAACAGCAGGT
TCAATTACATCGCAAACAAACGCAGTGAAACCTGGCGGGATATATCACTGCCCGGTTACA
ACTAACTCGGAGGATTGCACCCGTGTTAAGATGGACTTAGGCGAATCTACCAAATTAAAC
AATAAAACCGGACAATGGCTAGGAGTAAGTCTCAAAAGTCAAGGTCCAGGGAAGTACCTA
ATAACGTGCGCGCATAGACATTCGGTGAGATTGTACACAAAAGTTCACGAAGTTGAACAG
CTTTGTGGGAAATGTTTCCTATTGAATGGAACTTCCGATAATAAGTTGACAGAGATCCGC
CCCGAGGATGTAGACAACAGGTTTATTGGTAGTCGTCAACCCGATCATGGTGGTGTGGAA
TACGCACAGAGTGGCACAAGTTGCACGTTTGTGGGTGATGGAGAGTATTTGATGGGTGGG
CCGGGTATGTGGGCTTGGACTGGGGGGATGTTCGACGTAGAGATGGCTGACTTGGAGGCA
ACTGAGGCGTTGGATCTGTTCACGTCATCCACCGCGATGTACGAGACCCTCGGATGCTTT
AAGAACGAGATCGACAACCGCAAAGTGAAATGTGACAAAGATAGTTACCTCGGGTTCTCG
GTAGCTTCAAGCAAGACGTTGATTCCCGATCAAACCACCTACATCGCTGGTGCCCCTAGG
GGGAATTACACTGGGTCCGTCGTGCTCTACCAAAAAGTTGGTGGCCTTATCCCAATGGTG
GCCGACACACTTATGGGGGAATTTATCGGGTCGAGTTTCGGTTTCTCGGTGGAAGCCACT
GATCTAAACGGAGATGGGGTCGATGACCTGCTTGTCGGAGCTCCTCAGTATTACGAATAT
TCCAACGAAGGGAAGCACGGAGGGGCTGTCTACGTCTACATCAGTCAAGCTGGCAAAAAG
CTCAGTCAAACGCAGCCACAAAAGCTAACAGGGAAATTGGATTCATTTTTCGGGTATTCC
ATCTCCCCCCTCGGAGACATTGACCAGGATGGGTTTGGTGACTTCGCAGTCGGTGCACCT
CATGAAAAACCGCACGGAAAAGTTTACATTTTCCGAGGGTCCGCTGATGGGGCTGTCAAA
GAGTCCCAAGTATTCGACGGGTCCAATTTCACCGATATCACAACTGACATCAAAGGGTTT
GGGGTCTCTCTCTCAGGGGTGGTGGACATCGACAACAACAAGTACCCCGACTTGTTGGTC
GGAACATTGTCAGATTTCGTTGTGTTGTTGCGGTGA
| Gene3D |
Integrin_alpha_N (IPR028994) - T[31-491] 7.4E-112 |
| ProSiteProfiles |
Int_alpha_beta-p (IPR013519) - T[36-106] 9.568 - T[112-177] 6.818 - T[190-242] 6.443 - T[263-319] 6.759 - T[320-382] 13.419 - T[383-440] 12.42 - T[446-491] 7.686 |
| SMART |
Int_alpha_beta-p (IPR013519) - T[46-113] 2.0 - T[273-323] 0.041 - T[329-388] 1.0E-13 - T[393-447] 1.2E-15 |
| PRINTS |
Integrin_alpha (IPR000413) - T[274-286] 9.3E-39 - T[293-304] 9.3E-39 - T[326-346] 9.3E-39 - T[396-420] 9.3E-39 - T[460-481] 9.3E-39 |
| Pfam |
FG-GAP (IPR013517) - T[333-373] 3.7E-12 - T[397-431] 6.2E-8 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ITA7_HUMAN | 37.476 % | 283 | 1.14E-84 |
| ITA6_HUMAN | 34.549 % | 256 | 2.22E-75 |
| ITA3_HUMAN | 33.333 % | 229 | 4.75E-66 |