Aniseed - Transcript Card

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R4.1192784-1201725.15027.t

Possible name(s)

WNT2; WNT4; WNT6

Gene model

Cisavi.CG.ENS81.R4.1192784-1201725

Location

R4 [1,192,783 / 1,201,725]

Sequences

Amino acid sequence

Length: 541

>Cisavi.CG.ENS81.R4.1192784-1201725.15027.p
CHAATTAISSCKFCRKPIRRSTTFCRPKHKILEALPNSDDCGLKPQKKSIETITNPMKND
LQMRLCPNQQKTQTHSEATTNENVIFRTKSRTQKQHSKSKERRKIDGTAWSKHRRLFPAF
RSSVTILLLQVLIFCTANVAAVWWSPGNRPGLVDSERICLWARQIGGQQAEMCRNELSVV
NEIRKGIQNGAYNCAREFRTSRWNCTQTPKNFYAKALWQTTRETSFVQAVTSAAMTYAIT
IACSHGDIPECGCVNTRALKKEFLRREAQKRNHYINESHLESIVDKFDWEGCDDNVAFGY
QKTRQFLNLTRFIGRKRKVNLRLRLSQHNYEAGRLAITGNMKRKCKCHGLSDTCTLRTCW
LRMPSFDEVRANLRRKYESAVKVNMQPGSQRFVAAGQPRRSSNRRRISRLRRPNKVRRSV
NKNFPNRSRYRKAKALRRRARLRNNKRRRRIFPAITNADLVFHQVSPHFCRRDRRRGSLG
TKGRVCDPTREGPGGCGYMCCGRGYKREVVVVKKKCNCSFKYCCKVTCDECINRYTQYIC
R

Nucleotide sequence

Length: 1,626

>Cisavi.CG.ENS81.R4.1192784-1201725.15027.t
TGTCATGCAGCAACAACTGCTATTTCAAGCTGTAAATTTTGTAGAAAGCCAATTCGTAGA
TCCACCACGTTTTGTAGACCCAAGCACAAGATCTTGGAAGCATTACCGAACTCTGACGAT
TGTGGTTTGAAGCCACAGAAGAAAAGCATAGAAACAATTACCAATCCAATGAAAAACGAC
CTGCAGATGAGGCTGTGCCCTAATCAGCAGAAAACTCAAACGCATTCAGAAGCTACGACA
AACGAAAATGTTATATTTAGAACTAAATCCAGAACTCAAAAACAGCATTCAAAGTCGAAG
GAACGACGGAAAATTGACGGAACAGCGTGGAGCAAACACAGACGATTATTTCCCGCCTTT
CGTTCAAGCGTGACCATACTTCTGCTCCAAGTGCTGATATTCTGCACAGCAAACGTTGCC
GCTGTTTGGTGGAGTCCTGGCAATAGACCTGGTCTTGTGGACAGTGAGCGAATTTGTCTC
TGGGCTCGGCAAATTGGTGGACAACAGGCTGAAATGTGCAGGAACGAATTGTCTGTTGTT
AACGAGATCAGAAAAGGGATCCAGAACGGGGCATACAATTGTGCGCGAGAATTCCGTACT
TCAAGATGGAACTGTACCCAAACCCCTAAAAACTTTTACGCGAAAGCGCTTTGGCAAACA
ACAAGGGAGACCAGCTTTGTACAAGCAGTTACATCAGCAGCGATGACCTACGCAATAACT
ATAGCCTGTAGCCATGGTGACATACCAGAATGCGGCTGTGTCAACACACGGGCTTTGAAG
AAAGAATTCCTCCGAAGGGAAGCCCAGAAACGAAACCACTACATAAACGAAAGTCATCTC
GAGTCAATTGTGGACAAATTTGATTGGGAAGGCTGCGACGACAACGTGGCGTTCGGATAC
CAGAAAACACGTCAGTTTTTAAACCTAACCAGGTTTATTGGGCGAAAACGGAAAGTTAAC
TTACGGTTACGACTGAGCCAGCACAATTATGAAGCTGGGCGACTGGCGATTACCGGCAAT
ATGAAAAGAAAATGCAAGTGCCATGGCCTATCGGACACCTGCACACTGCGTACATGCTGG
CTGAGAATGCCAAGTTTCGACGAAGTACGTGCAAATTTACGAAGGAAGTACGAATCCGCC
GTAAAAGTTAACATGCAGCCTGGTAGCCAAAGATTCGTTGCTGCTGGCCAACCAAGAAGA
AGTAGCAACCGCCGCAGAATATCTCGTTTAAGGAGACCGAATAAAGTGAGAAGGAGCGTC
AATAAAAACTTTCCGAACAGATCACGTTACCGAAAAGCTAAAGCACTACGTCGAAGAGCT
CGATTAAGGAACAACAAGCGTCGAAGACGAATCTTTCCCGCAATCACCAACGCAGACTTA
GTGTTTCACCAGGTTTCTCCCCATTTTTGTCGCCGTGACCGACGCAGAGGCAGTTTGGGG
ACAAAGGGTCGTGTTTGTGACCCAACGCGCGAGGGTCCAGGCGGTTGTGGCTATATGTGT
TGTGGAAGAGGCTACAAACGGGAAGTTGTGGTGGTCAAGAAAAAATGTAACTGTTCCTTT
AAATATTGTTGCAAGGTCACATGCGATGAGTGTATAAATCGGTACACGCAGTACATATGC
AGATAG

InterProScan

PANTHER	Wnt (IPR005817) - T[120-541] 2.5E-145
SMART	Wnt (IPR005817) - T[161-541] 4.6E-84
Pfam	Wnt (IPR005817) - T[164-541] 3.1E-96
PRINTS	Wnt (IPR005817) - T[222-236] 5.9E-20 - T[241-254] 5.9E-20 - T[287-299] 5.9E-20 - T[346-360] 5.9E-20 - T[459-470] 5.9E-20

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
WNT4_HUMAN	29.736 %	204	3.99E-61
WNT2_HUMAN	30.808 %	200	2.3E-59
WNT6_HUMAN	32.426 %	219	2.54E-66