Aniseed - Transcript Card

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R401.114744-119324.00508.t

Possible name(s)

GJC1; GJC2; GJD3

Gene model

Cisavi.CG.ENS81.R401.114744-119324

Location

R401 [115,697 / 119,243]

Sequences

Amino acid sequence

Length: 186

>Cisavi.CG.ENS81.R401.114744-119324.00508.p
STFPGKLWIIMMFIFRIVVVARIGDMVYHDEQSHFVCNTLSPGCSNVCFNAFSPISQLRF
WSLMVLVVSTPGILFCIYASHKIYHAYVKFPLANKQNKIMLENPQLYRAYWWHVVIRTIL
EVGFLVGQYYLYGWFVPELFECARWPCPKTVDCFVSRPMEKTCLLWLMFGLEPKLTQIPC
LFNYIG

Nucleotide sequence

Length: 558

>Cisavi.CG.ENS81.R401.114744-119324.00508.t
TCCACGTTCCCAGGGAAGCTATGGATCATAATGATGTTCATATTCCGTATTGTGGTGGTT
GCGAGGATAGGGGACATGGTATACCACGATGAACAGTCGCATTTTGTTTGCAACACCTTA
TCCCCGGGGTGTTCCAATGTATGTTTCAACGCATTCAGCCCGATTTCCCAACTCCGCTTC
TGGTCGCTTATGGTGCTGGTCGTGTCCACCCCTGGAATACTTTTCTGCATCTACGCAAGC
CACAAGATCTACCACGCTTACGTCAAGTTCCCACTGGCGAACAAACAAAACAAGATAATG
CTCGAGAACCCGCAGTTGTACCGAGCTTATTGGTGGCACGTGGTGATTCGGACGATTCTA
GAGGTTGGATTTCTGGTGGGCCAGTACTACTTGTACGGTTGGTTCGTGCCTGAGTTGTTT
GAATGCGCAAGGTGGCCGTGCCCGAAAACTGTGGATTGCTTCGTATCACGACCTATGGAG
AAGACGTGTCTTCTGTGGCTCATGTTTGGCCTTGAGCCGAAACTTACGCAAATTCCATGT
TTATTCAATTATATTGGA

InterProScan

PANTHER	Connexin (IPR000500) - T[1-89] 2.7E-85 - T[99-171] 2.7E-85
Pfam	Connexin_N (IPR013092) - T[1-171] 5.8E-64
Gene3D	Connexin_N_sf (IPR038359) - T[1-176] 4.2E-61
PRINTS	Connexin (IPR000500) - T[4-28] 4.5E-43 - T[35-57] 4.5E-43 - T[60-80] 4.5E-43 - T[106-132] 4.5E-43 - T[142-162] 4.5E-43
SMART	Connexin_N (IPR013092) - T[26-59] 1.4E-11
SMART	Connexin_CCC (IPR019570) - T[120-185] 7.7E-24
ProSitePatterns	Connexin_CS (IPR017990) - T[142-158] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
CXG1_HUMAN	36.486 %	157	7.09E-47
CXA8_HUMAN	38.462 %	155	9.4E-46
CXA3_HUMAN	37.824 %	149	1.66E-43