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TRANSCRIPT CARD

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  1. Clone 'cima860752' > 
  2. Transcript 'Harore.CG.MTP2014.S3...' > 
  3. Transcript 'KH2012:KH.C7.436.v1....' > 
  4. Transcript 'KH2012:KH.C5.42.v3.A...' > 
  5. Transcript 'Cisavi.CG.ENS81.R388...'

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R388.36348-44224.03194.t

Possible name(s)

SAMD8; SGMS1; SGMS2

Gene model

Cisavi.CG.ENS81.R388.36348-44224

Location

R388 [36,356 / 44,224]

Sequences

Amino acid sequence

Length: 401

>Cisavi.CG.ENS81.R388.36348-44224.03194.p
KVMFIHDWGCSEVEQWLISEGFEKYSDLICNEHEVDGEVLLSLNENDLRKPPLQLTKLSD
IKKLWRSLKLLQQKSKIECSALKGAFYSLPFTGPATHKNGMYNNSNNNHGKTIDYDSDNL
MLDSDMEEPIILRNKGVNFLPELNKLFVSFMYATFVSWVTAYMMVLVHERVPDKQKYPPL
PDIFLDNVPLIPYAFQLAEFCGLFLATMWLLILIFHKHRWRYCIYIFSNINLMISPRLIS
VDNISKVQASMYNSSWERLVRATEIMVGCGMTLTGVHTCGDYMFSGHTAYLTLFNHLITE
YTPTKFYRLHTLSWVLNLFGIFFVLAAHEHYSIDVVIAFYITSRIFLYYHMLANTRCYWH
SKRVKIWFPLLSYFECNVPGKVPNEYEWPIQLKNLRKRFTL

Nucleotide sequence

Length: 1,203

>Cisavi.CG.ENS81.R388.36348-44224.03194.t
AAAGTCATGTTTATCCATGACTGGGGTTGCAGTGAAGTGGAACAATGGCTGATATCAGAA
GGTTTCGAAAAGTACTCGGATTTAATCTGCAATGAACATGAAGTGGACGGTGAAGTTTTG
CTATCGCTCAATGAAAATGACCTACGGAAACCGCCTTTGCAACTTACAAAGTTAAGCGAT
ATTAAGAAGTTATGGCGATCTTTGAAACTTCTGCAGCAAAAGAGTAAAATCGAATGTTCA
GCTTTAAAAGGTGCTTTTTACTCCCTCCCCTTCACAGGACCAGCGACACACAAGAATGGA
ATGTACAACAACAGCAATAACAACCACGGGAAGACAATTGATTATGACAGCGACAACCTG
ATGTTGGATAGCGACATGGAAGAACCAATCATACTAAGGAACAAGGGGGTTAATTTCCTG
CCAGAACTGAACAAATTATTTGTGAGCTTCATGTACGCCACATTTGTGTCCTGGGTCACA
GCATACATGATGGTGTTGGTTCATGAAAGGGTGCCAGATAAGCAGAAATATCCCCCATTA
CCCGATATCTTTCTCGACAACGTCCCTCTCATTCCGTATGCGTTCCAGCTCGCTGAGTTT
TGTGGCCTCTTTCTCGCCACCATGTGGTTGCTCATTCTCATCTTTCATAAACACAGGTGG
CGCTATTGTATTTATATCTTTTCGAACATAAATCTAATGATATCTCCAAGACTTATATCT
GTTGATAATATCTCTAAGGTCCAAGCATCGATGTACAACTCATCATGGGAAAGATTAGTG
AGAGCTACAGAGATTATGGTTGGATGTGGAATGACACTGACAGGTGTTCATACATGTGGA
GATTATATGTTCAGTGGTCATACTGCATATCTAACTCTGTTCAACCATCTTATTACAGAG
TACACCCCAACCAAATTCTACCGACTCCACACTTTATCTTGGGTGTTGAATCTGTTCGGG
ATATTCTTTGTTCTTGCCGCCCATGAGCACTACTCAATTGATGTGGTGATAGCCTTCTAC
ATAACATCACGCATCTTCTTGTATTACCACATGCTCGCAAACACAAGATGTTACTGGCAC
AGCAAACGGGTCAAGATTTGGTTCCCTCTTCTATCCTATTTTGAGTGTAACGTACCAGGG
AAAGTCCCTAATGAATATGAATGGCCAATACAGCTCAAAAACCTACGAAAACGGTTCACT
TTA

InterProScan

SUPERFAMILY
SAM/pointed_sf (IPR013761) - T[5-74] 2.39E-15
SMART
SAM (IPR001660) - T[5-74] 3.6E-7
Pfam
SAM (IPR001660) - T[7-70] 8.9E-10
ProSiteProfiles
SAM (IPR001660) - T[8-74] 13.092
Pfam
Sphingomyelin_synth-like_dom (IPR025749) - T[278-351] 7.4E-25

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SMS1_HUMAN 30.905 % 192 5.2E-57
SMS2_HUMAN 35.252 % 174 8.78E-51
SAMD8_HUMAN 47.215 % 362 2.42E-123