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  1. Transcript 'Cisavi.CG.ENS81.R388...'

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R388.36348-44224.03193.t

Possible name(s)

SAMD8; SGMS1; SGMS2

Location

R388 [36,347 / 40,808]

Sequences

Amino acid sequence

Length: 242

>Cisavi.CG.ENS81.R388.36348-44224.03193.p
LVHERVPDKQKYPPLPDIFLDNVPLIPYAFQLAEFCGLFLATMWLLILIFHKHRWRYFSN
INLMISPRLISNKLSFFRISQISSKTYRKSMYNSSWERLVRATEIMVGCGMTLTGVHTCG
DYMFSGHTAYLTLFNHLITEYTPTKFYRLHTLSWVLNLFGIFFVLAAHEHYSIDVVIAFY
ITSRIFLYYHMLANTRYTLFISQIWFPLLSYFECNVPGKVPNEYEWPIQLKNLRKRFTLT
PK

Nucleotide sequence

Length: 726

>Cisavi.CG.ENS81.R388.36348-44224.03193.t
TTGGTTCATGAAAGGGTGCCAGATAAGCAGAAATATCCCCCATTACCCGATATCTTTCTC
GACAACGTCCCTCTCATTCCGTATGCGTTCCAGCTCGCTGAGTTTTGTGGCCTCTTTCTC
GCCACCATGTGGTTGCTCATTCTCATCTTTCATAAACACAGGTGGCGCTATTTTTCGAAC
ATAAATCTAATGATATCTCCAAGACTTATATCTAACAAATTATCTTTCTTCAGAATATCC
CAAATATCATCTAAAACTTATAGAAAATCGATGTACAACTCATCATGGGAAAGATTAGTG
AGAGCTACAGAGATTATGGTTGGATGTGGAATGACACTGACAGGTGTTCATACATGTGGA
GATTATATGTTCAGTGGTCATACTGCATATCTAACTCTGTTCAACCATCTTATTACAGAG
TACACCCCAACCAAATTCTACCGACTCCACACTTTATCTTGGGTGTTGAATCTGTTCGGG
ATATTCTTTGTTCTTGCCGCCCATGAGCACTACTCAATTGATGTGGTGATAGCCTTCTAC
ATAACATCACGCATCTTCTTGTATTACCACATGCTCGCAAACACAAGATATACATTGTTT
ATCTCACAGATTTGGTTCCCTCTTCTATCCTATTTTGAGTGTAACGTACCAGGGAAAGTC
CCTAATGAATATGAATGGCCAATACAGCTCAAAAACCTACGAAAACGGTTCACTTTAACC
CCAAAG

InterProScan

Pfam
Sphingomyelin_synth-like_dom (IPR025749) - T[118-191] 3.0E-25

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SMS1_HUMAN 37.083 % 162 6.47E-48
SMS2_HUMAN 36.1 % 159 6.23E-47
SAMD8_HUMAN 56.612 % 271 6.74E-90