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TRANSCRIPT CARD

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  1. Transcript 'Haaura.CG.MTP2014.S3...' > 
  2. Transcript 'Boleac.CG.SB_v3.S516...' > 
  3. Transcript 'Harore.CG.MTP2014.S2...' > 
  4. Transcript 'KH2012:KH.C5.184.v2....' > 
  5. Transcript 'Cisavi.CG.ENS81.R3.3...'

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R3.384263-390396.03809.t

Possible name(s)

HMCN1; HMCN2; NCAM1

Gene model

Cisavi.CG.ENS81.R3.384263-390396

Location

R3 [384,262 / 390,396]

Sequences

Amino acid sequence

Length: 275

>Cisavi.CG.ENS81.R3.384263-390396.03809.p
MNEIALTIAAAFLLLQAANCQTVQPSTEPIKAELGGIVVIPCDLMLTENETLFTVLWKHN
EDDIATIGGNGQVYPHGQYGERAFVDVTTYTLTLNNLMLDDSGTYVCSGFGNTGSKSQSL
QVDVLSSPQVSTRVNPYLDDGMGSGTATLAVCTATAASEPFTMNWLTDMGDVVVPDSFRA
DTPNEEFYSLIDSSLYLDIRPDAERDNGRKFVCSVQDAFGKMIESEAFLIVTAPTTTPQT
TTIQASPMITSFPTNDGGQITMVMGNQRAFECAAI

Nucleotide sequence

Length: 1,088

>Cisavi.CG.ENS81.R3.384263-390396.03809.t
ATTTTATCAAATACTTTCCATTAGTATTTATAGGGAATTTGATTTTTATCCACGTTTATT
AAAGGTAAAATTACAGAGATGAACGAAATTGCGTTGACAATTGCAGCGGCTTTTCTATTG
CTACAAGCTGCTAACTGTCAAACTGTGCAACCTTCTACGGAGCCAATTAAAGCCGAGTTG
GGAGGAATAGTCGTGATCCCATGTGATTTAATGCTTACTGAGAATGAAACGCTTTTCACT
GTACTTTGGAAACACAATGAAGATGATATTGCGACTATTGGTGGGAATGGACAGGTCTAT
CCGCATGGCCAATACGGGGAACGCGCCTTTGTGGACGTGACAACATATACATTGACGCTC
AACAATCTTATGTTAGACGACTCTGGCACATACGTTTGCAGTGGATTCGGTAATACGGGA
TCGAAAAGTCAGTCACTGCAAGTCGATGTGTTATCCTCTCCGCAAGTTAGCACAAGGGTG
AATCCTTACTTGGACGATGGAATGGGCTCCGGAACCGCCACTCTCGCAGTGTGCACAGCA
ACTGCTGCCAGTGAGCCGTTTACTATGAACTGGTTAACTGACATGGGGGATGTGGTGGTT
CCTGATTCATTTCGAGCTGATACTCCCAACGAAGAATTTTATTCGCTTATTGACAGCTCC
TTGTACCTCGATATTCGTCCTGACGCAGAAAGGGATAACGGAAGAAAATTCGTTTGCTCT
GTGCAAGACGCGTTTGGAAAGATGATCGAATCTGAAGCGTTTCTTATTGTAACAGCTCCA
ACAACAACACCGCAAACCACAACCATACAAGCATCTCCTATGATTACGTCATTTCCTACA
AATGATGGAGGTCAGATCACCATGGTGATGGGAAATCAGAGAGCATTTGAGTGCGCCGCA
ATTTAGTTCAACCTATATTTTGTACATATAGTCTCTTTGTTAGTATTCCCGCACAGTTAC
TGCTTACCCGAACCGCCATGGTCTTTCTGTTCAAATGTAAAAATGCTTTAAATCCATGTT
ACAAGATGCTTCTGTCGAATTAACCGGAACGTTTCTGCTTGGTCGCGTGTTGTATTACAA
TTCATGCA

InterProScan

Gene3D
Ig-like_fold (IPR013783) - T[20-138] 2.2E-16
SUPERFAMILY
Ig-like_dom_sf (IPR036179) - T[25-130] 5.53E-13
ProSiteProfiles
Ig-like_dom (IPR007110) - T[25-123] 8.52 - T[128-229] 8.23
SMART
Ig_sub (IPR003599) - T[27-125] 8.3E-6
Pfam
Ig_V-set (IPR013106) - T[28-124] 2.2E-7

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value