- Transcript 'Phfumi.CG.MTP2014.S5...' >
- Transcript 'Cisavi.CG.ENS81.R31....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R31.744705-763735.04590.t
Possible name(s)
NR5A1; NR5A2; NR6A1
Gene model
Location
R31 [758,458 / 763,449]
Amino acid sequence
Length: 458
>Cisavi.CG.ENS81.R31.744705-763735.04590.p
TDDGKEVKSCLICGDRATGLHYGIISCEGCKGFFKRSICNKRVYRCTRSKNCVMSRKQRN
RCQFCRLLKCLQMGMNRKAIREDGMPGGRNKSIGPVQISNEEIERILSGKDFEEEAAREE
QQQQQQQMEQVNNAYASIGHTGYVPLFSPGSGPQFPPNMMSSNSGSPPLNNGMRSAPTSA
SMNPRSLLAGGNSQMGYMPSMQGMAARERSPESGSELTSSALVEQLVLAEDCSYLSSIGA
EHGFDELTISKLFSVLCKVADEMLYRQIVWIKKLPFFETISIKDHTTLLSTTWAEIILLA
SLCVHEDQLFGDLADITSKYLPDSEELSRFTDYEMEILERMTYLYQKFTHLKIDKEEYVI
MKVINFLNQDIKGLQEVERVEEINKRYWYACQRFTELRAMERNAGRSNGSPNSTASGASR
FRDLMLCLPEIRYVAGKMLNTDVTKLPLLFKAILHTCK
Nucleotide sequence
Length: 1,510
>Cisavi.CG.ENS81.R31.744705-763735.04590.t
ACAGATGACGGAAAAGAAGTAAAAAGCTGTTTGATATGTGGAGATCGAGCCACAGGACTG
CACTACGGCATTATATCGTGCGAGGGATGTAAAGGATTCTTCAAACGTAGTATCTGCAAC
AAGCGAGTCTACAGATGTACACGAAGCAAGAACTGTGTTATGTCCAGAAAACAAAGAAAT
CGTTGCCAATTTTGCCGCTTGCTTAAATGCTTACAAATGGGCATGAACAGAAAAGCCATC
CGAGAAGACGGCATGCCTGGTGGGAGAAATAAGAGCATCGGTCCTGTTCAGATCTCCAAC
GAGGAAATTGAGCGAATCCTTTCTGGCAAAGACTTCGAGGAGGAAGCGGCGCGCGAGGAG
CAGCAACAACAGCAGCAGCAAATGGAGCAAGTCAACAACGCATACGCATCAATCGGCCAC
ACCGGTTATGTGCCGCTGTTTTCGCCCGGTTCAGGGCCTCAGTTCCCCCCCAACATGATG
TCATCGAACTCGGGTTCTCCCCCGCTGAACAACGGCATGCGAAGCGCACCCACATCAGCA
TCGATGAATCCTCGCTCACTACTCGCGGGTGGCAATTCGCAGATGGGCTACATGCCTTCC
ATGCAGGGAATGGCGGCTAGGGAGCGCTCGCCCGAGTCGGGATCTGAATTAACCAGCAGT
GCGTTGGTGGAACAGCTGGTGCTTGCAGAAGATTGTTCTTATCTTTCTTCGATCGGAGCC
GAGCACGGGTTCGATGAGCTCACCATCAGCAAGTTGTTTAGCGTGCTATGTAAAGTCGCC
GATGAGATGCTTTATCGTCAAATAGTTTGGATTAAAAAGTTGCCATTTTTCGAAACAATA
TCAATCAAGGATCACACAACGCTCTTAAGCACGACATGGGCGGAAATCATACTTCTAGCA
TCACTGTGCGTCCACGAAGATCAATTGTTCGGCGATCTCGCTGATATAACTTCGAAATAC
TTACCGGACAGTGAAGAACTATCGAGATTCACGGACTACGAGATGGAGATACTCGAAAGA
ATGACGTACCTCTATCAAAAGTTTACGCATCTCAAGATAGACAAGGAAGAATATGTAATC
ATGAAAGTAATCAACTTTTTAAACCAAGACATCAAAGGGCTGCAAGAAGTGGAGAGAGTT
GAGGAAATCAACAAGCGGTACTGGTATGCCTGTCAGAGATTCACCGAGCTTCGAGCCATG
GAACGAAACGCTGGAAGATCGAATGGTTCCCCAAATTCCACCGCTTCCGGGGCCTCTAGG
TTCCGTGATCTGATGCTCTGCCTTCCTGAGATCCGATACGTAGCGGGGAAGATGCTGAAC
ACCGATGTTACCAAGTTACCGCTGCTATTTAAGGCCATTCTTCACACCTGCAAGCTTCAG
AAATTGCAATCAGCTCCTGTAGCACCACGACTTTTGAATGAAGGAGTCACTTCTTCCACC
CCTCCTTCACCCACATCTTCGCCAACCGAACAACAAAGAAGCGTCAGAGACGAAGACAAA
ATGGCGGCCG
| Gene3D |
Znf_NHR/GATA (IPR013088) - T[1-109] 4.4E-33 |
| SMART |
Znf_hrmn_rcpt (IPR001628) - T[7-78] 4.5E-34 |
| ProSiteProfiles |
Znf_hrmn_rcpt (IPR001628) - T[7-82] 20.178 |
| Pfam |
Znf_hrmn_rcpt (IPR001628) - T[9-77] 7.2E-28 |
| PRINTS |
Znf_hrmn_rcpt (IPR001628) - T[10-26] 1.8E-17 - T[26-41] 1.8E-17 - T[59-67] 1.8E-17 - T[67-75] 1.8E-17 |
| ProSitePatterns |
Znf_hrmn_rcpt (IPR001628) - T[10-36] . |
| PRINTS |
Nuclear_hrmn_rcpt (IPR001723) - T[71-81] 8.8E-17 - T[259-280] 8.8E-17 - T[280-296] 8.8E-17 - T[351-366] 8.8E-17 - T[423-440] 8.8E-17 |
| SUPERFAMILY |
NHR_like_dom_sf (IPR035500) - T[80-91] 1.14E-36 - T[195-455] 1.14E-36 |
| Pfam |
Nucl_hrmn_rcpt_lig-bd (IPR000536) - T[256-437] 1.1E-13 |
| SMART |
Nucl_hrmn_rcpt_lig-bd (IPR000536) - T[258-435] 2.4E-22 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| NR6A1_HUMAN | 54.352 % | 481 | 4.68E-168 |
| NR5A2_HUMAN | 27.31 % | 156 | 4.52E-42 |
| STF1_HUMAN | 23.529 % | 123 | 8.38E-31 |