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TRANSCRIPT CARD

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  1. Region 'REG00001543' > 
  2. Transcript 'Moocul.CG.ELv1_2.S72...' > 
  3. Transcript 'Mooccu.CG.ELv1_2.S43...' > 
  4. Transcript 'KH2012:KH.C1.1069.v1...' > 
  5. Transcript 'Cisavi.CG.ENS81.R31....'

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R31.744705-763735.04589.t

Possible name(s)

NR5A1; NR5A2; NR6A1

Gene model

Cisavi.CG.ENS81.R31.744705-763735

Location

R31 [744,704 / 758,622]

Sequences

Amino acid sequence

Length: 114

>Cisavi.CG.ENS81.R31.744705-763735.04589.p
MDIAIFNSGYNFPEMNGVDMTRYPGWPPHQAHSSNMIRASLPNIDHNSLQTSNEINNNMY
TDDGKEVKSCLICGDRATGLHYGIISCEGCKGFFKRSICNKRVYRCTRSKNCVM

Nucleotide sequence

Length: 509

>Cisavi.CG.ENS81.R31.744705-763735.04589.t
GGTGATATGTCTATCCTAAACACAATTTTAAATATATGAATGTAATACTGGTACATCAAA
TGTAAAACAAATCTTCACTGAAAACAACTCGATCTACCTCTTGCATATTCCTTCCAATAC
CTCGTCTAACAAAGTGCAACATTTAAATTCAATCCCAATTGCGATATGGACATTGCTATT
TTCAACTCTGGTTACAATTTTCCTGAAATGAATGGTGTAGACATGACAAGATACCCGGGA
TGGCCACCTCATCAAGCCCACTCCAGCAACATGATTCGAGCCTCTCTGCCCAATATCGAC
CACAATTCATTGCAAACAAGCAACGAAATAAACAACAACATGTATACTGATGACGGAAAA
GAAGTAAAAAGCTGTTTGATATGTGGAGATCGAGCCACAGGACTGCACTACGGCATTATA
TCGTGCGAGGGATGTAAAGGATTCTTCAAACGTAGTATCTGCAACAAGCGAGTCTACAGA
TGTACACGAAGCAAGAACTGTGTTATGTC

InterProScan

Gene3D
Znf_NHR/GATA (IPR013088) - T[59-114] 6.4E-18
SMART
Znf_hrmn_rcpt (IPR001628) - T[67-113] 1.5E-9
ProSiteProfiles
Znf_hrmn_rcpt (IPR001628) - T[67-114] 14.329
Pfam
Znf_hrmn_rcpt (IPR001628) - T[69-114] 5.1E-18
PRINTS
Znf_hrmn_rcpt (IPR001628) - T[70-86] 2.42E-11 - T[86-101] 2.42E-11
ProSitePatterns
Znf_hrmn_rcpt (IPR001628) - T[70-96] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RORB_HUMAN 57.143 % 73.2 1.78E-16
NR1H4_HUMAN 60 % 73.2 2.08E-16
NR6A1_HUMAN 85.185 % 109 1.92E-29