- Transcript 'Cisavi.CG.ENS81.R3.1...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R3.1152242-1154981.07927.t
Possible name(s)
ZNF227; ZNF665; ZNF93
Gene model
Location
R3 [1,152,253 / 1,154,981]
Amino acid sequence
Length: 470
>Cisavi.CG.ENS81.R3.1152242-1154981.07927.p
LENTWYHRNTGVLCNTKSCVRKMHVKICKVCDKQFEKLCDLLIHIRIHTGEKPFSCNVCG
KSFRSYKTLKGHENSHTLLKRYKCEECDKFFMTVSNLNQHKMIHSGTKPYKCDLCEQSFS
QNSTLTCHKYTHMVEKLFKCNKCEKSFYQPNQLKRHLKVHTGKRPNKCDLCGKSYREVYE
LKKHQLSHSEEKPYECKVCGKRFKISKAITRHEKIHTGEKPYICTVCERAFQQLSHLKRH
HKMHTGEKPYKCDVCDKEFGEADGLKLHQRIHTGNKPCKCDICEKEFRSQGNLGRHRKSH
YVDIPNRLKDGKEAFQQTGNLGLHQRNHTQEKPCKCDVCGKSFNYPCKLKNHQRMHTGVR
PYECGECGKSFHYTSNLKKHRRIHTGERPYICEVCDKAFSNKCNLKKHQTTHTREGHFEC
NVCGKSFNYSKHLKNHQRIHNRERPHKCNVCDKSYKSICYLKKHQRIHTA
Nucleotide sequence
Length: 1,410
>Cisavi.CG.ENS81.R3.1152242-1154981.07927.t
TTGGAAAACACATGGTACCATAGAAACACTGGCGTTCTTTGTAATACTAAGTCCTGCGTC
AGAAAAATGCATGTAAAAATATGCAAAGTTTGTGATAAACAGTTCGAAAAACTGTGTGAT
CTATTGATTCACATAAGAATTCACACTGGTGAGAAACCTTTTAGCTGTAACGTGTGTGGA
AAATCGTTTCGCAGTTATAAAACATTGAAAGGTCATGAAAACTCGCACACTTTGTTGAAA
CGCTACAAATGTGAGGAGTGTGACAAATTCTTCATGACCGTGAGCAACCTAAACCAGCAT
AAGATGATCCACAGTGGAACGAAACCGTACAAGTGTGACTTGTGTGAACAGTCATTTTCC
CAAAACAGTACTTTGACTTGTCACAAATATACTCATATGGTTGAGAAACTGTTTAAGTGC
AACAAGTGTGAAAAGTCTTTTTACCAACCTAATCAATTAAAACGACACCTGAAGGTCCAC
ACTGGAAAAAGGCCAAACAAATGCGATTTGTGTGGGAAGTCATACCGTGAGGTTTATGAA
TTGAAAAAACACCAATTAAGTCACTCTGAAGAGAAACCTTACGAATGTAAGGTGTGTGGC
AAAAGGTTTAAGATATCGAAAGCTATAACCAGACATGAAAAAATTCATACTGGAGAGAAA
CCTTATATCTGCACTGTGTGTGAACGGGCATTCCAACAGTTAAGTCATTTAAAAAGACAC
CATAAAATGCATACCGGAGAGAAGCCTTACAAGTGTGATGTCTGTGACAAAGAATTTGGG
GAGGCCGATGGTTTAAAATTACACCAGAGAATTCACACCGGAAATAAACCTTGCAAATGT
GATATTTGTGAAAAGGAATTTAGATCACAAGGTAATTTAGGGAGGCACCGAAAAAGTCAC
TATGTGGACATACCCAATAGACTTAAGGATGGTAAAGAAGCATTTCAACAGACTGGAAAT
CTTGGACTTCACCAACGAAATCACACACAAGAGAAGCCATGCAAATGCGATGTGTGTGGA
AAATCATTTAACTATCCATGCAAATTAAAAAATCACCAAAGAATGCACACTGGAGTGAGA
CCTTATGAGTGTGGTGAATGTGGAAAATCATTCCATTATACCAGCAATTTAAAAAAACAT
CGAAGAATTCACACGGGAGAAAGGCCATACATATGTGAGGTATGTGATAAGGCATTTAGC
AACAAGTGCAATTTGAAAAAGCACCAAACAACCCACACTAGAGAAGGCCATTTCGAATGC
AATGTGTGTGGAAAATCCTTCAATTATAGCAAACATTTAAAAAATCACCAACGGATTCAC
AACAGGGAAAGGCCGCATAAATGTAATGTGTGTGATAAGTCATACAAATCTATTTGCTAT
TTGAAAAAGCATCAAAGAATCCACACTGCA
| SMART |
Znf_C2H2_type (IPR013087) - T[26-48] 0.17 - T[54-76] 0.0031 - T[82-104] 0.001 - T[110-132] 0.28 - T[138-160] 2.3E-4 - T[166-188] 0.067 - T[194-216] 0.0067 - T[222-244] 0.028 - T[250-272] 0.001 - T[278-300] 0.016 - T[334-356] 0.031 - T[362-384] 0.0022 - T[390-412] 4.1E-4 - T[418-440] 5.5E-4 - T[446-468] 0.014 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[26-53] 13.671 - T[54-81] 12.196 - T[82-109] 15.313 - T[110-137] 12.3 - T[138-165] 16.228 - T[166-193] 13.235 - T[194-221] 16.332 - T[222-249] 16.352 - T[250-277] 15.625 - T[278-305] 10.99 - T[334-361] 14.544 - T[362-389] 18.472 - T[390-417] 13.193 - T[418-445] 16.456 - T[446-470] 11.884 |
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[27-76] 2.48E-14 - T[91-147] 3.15E-17 - T[146-203] 4.2E-19 - T[203-259] 1.84E-20 - T[244-296] 4.22E-18 - T[314-371] 2.37E-20 - T[370-427] 1.02E-20 - T[417-468] 4.24E-15 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[28-48] . - T[56-76] . - T[84-104] . - T[112-132] . - T[140-160] . - T[168-188] . - T[196-216] . - T[224-244] . - T[252-272] . - T[278-300] . - T[334-356] . - T[364-384] . - T[392-412] . - T[420-440] . - T[448-468] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZN665_HUMAN | 47.63 % | 405 | 2.14E-136 |
| ZN227_HUMAN | 45.824 % | 399 | 1.08E-131 |
| ZN888_HUMAN | 47.178 % | 395 | 5.5E-131 |
