- Transcript 'Cisavi.CG.ENS81.R3.1...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R3.1024987-1043961.07626.t
Possible name(s)
NEDD4L; SMURF1; SMURF2
Gene model
Location
R3 [1,036,308 / 1,043,214]
Amino acid sequence
Length: 654
>Cisavi.CG.ENS81.R3.1024987-1043961.07626.p
YVGKADSITISVWDNRKVRKKNGAGFLGCIRIMSNAINRLKDTGYQRLDLCKQAQYDQEP
VRGSIESRDSDDRTTQWERPTQPCTRGTRRPHSALLISEPDQHRPRISSSSGSSEPRSSL
SPPAATDPNTNRFRRHKNFMTRNQLHGPSAPLPEGYEQRTTQQGQVYFLHTQTGVSSWHD
PRIPRNLTHINPEDLGPLPSGWELRSTATGRLYYVDHSSRTTQFTDPRIGRYIGQMQNRG
RKGKNYQDPQLPRYKRDLVQKHKVLRTELQSQQPQTGHCRLEIKRSEAFEQSAVIASCQR
NSALMSRRCRCVLIMKMKPKDLRKRLMVKFVGEDGLDYGGLAREWLYILSHEMLNPYYGL
FQYSREDNYTLQINPDSHINPDHLSYFHFVGRILGMAVYHGHYIDGGFTMLFYKQLLGKP
ISLDDMEEVDPALYKSMKWILQNDIHDVLDHTFCADHDSFGERITHELKPNGANVEVTEE
NKREYVKLYVNWRFMRGIEAQFLSLSKGFYELIPQHLLRPFDERELELIIGGLGKIDLVD
WRKHTKLKHCSQDSNIVKWFWQAVESFDQEKRARVLQFVTGSRVPLQGFKALQGSTGTQG
PRLFTIQFIDSKTDSLPKAHTCFNRIDLPPYETYEKLLDKLTCAVENTCGFYTE
Nucleotide sequence
Length: 1,965
>Cisavi.CG.ENS81.R3.1024987-1043961.07626.t
TACGTTGGGAAAGCGGACAGCATCACCATCTCGGTGTGGGACAACAGGAAGGTGCGAAAG
AAGAACGGAGCCGGTTTCCTCGGCTGTATACGCATCATGTCGAACGCCATAAACCGACTG
AAAGACACAGGATATCAGCGTCTGGACCTGTGCAAGCAGGCCCAATACGACCAGGAACCC
GTCAGAGGTTCCATCGAAAGTCGCGACTCGGACGACCGAACCACGCAGTGGGAACGACCA
ACGCAGCCTTGCACACGAGGCACCCGCCGCCCACACAGCGCCCTCCTCATCTCCGAGCCC
GACCAGCACCGACCGCGCATCTCGAGCAGCAGCGGAAGTTCCGAGCCCCGGTCCTCCCTC
AGTCCACCCGCCGCCACCGACCCGAACACAAATCGATTCCGGCGCCACAAGAACTTCATG
ACCCGCAACCAGTTACACGGACCCTCCGCGCCCCTGCCCGAGGGCTACGAGCAACGGACT
ACCCAGCAGGGTCAGGTGTATTTCCTGCACACCCAAACGGGGGTATCGTCGTGGCACGAC
CCGCGCATACCACGGAACTTAACTCACATAAACCCGGAGGACTTGGGCCCTTTGCCTTCG
GGCTGGGAATTACGCTCGACGGCCACGGGTCGACTTTATTACGTGGACCACTCTAGCAGG
ACCACCCAGTTCACCGACCCGAGGATTGGTCGATATATCGGTCAAATGCAGAACAGAGGG
AGAAAAGGTAAGAATTATCAAGATCCCCAGCTACCTCGCTACAAACGCGATCTGGTGCAG
AAGCACAAGGTTCTACGCACCGAGCTGCAGTCGCAGCAGCCACAGACCGGCCATTGTCGT
CTGGAAATCAAGCGATCCGAAGCTTTCGAGCAGTCCGCAGTAATTGCCTCATGCCAAAGA
AATTCCGCTTTAATGTCTAGACGTTGTCGGTGTGTCCTTATTATGAAGATGAAACCAAAA
GATTTACGGAAACGTCTAATGGTGAAATTCGTGGGCGAGGATGGATTGGATTATGGCGGC
CTTGCTAGAGAATGGCTCTATATTTTATCGCATGAGATGCTAAACCCTTACTACGGATTA
TTCCAGTACTCCCGCGAGGACAACTACACTCTTCAAATCAACCCCGATTCGCACATCAAC
CCCGACCACCTTTCCTACTTCCACTTCGTCGGCCGCATACTGGGCATGGCGGTCTACCAC
GGCCACTACATCGACGGCGGCTTCACCATGTTGTTCTACAAGCAACTCCTCGGGAAACCG
ATCTCGCTCGACGATATGGAAGAGGTCGACCCCGCGTTGTACAAGTCGATGAAGTGGATC
CTGCAGAACGACATCCACGACGTGCTCGACCACACATTCTGCGCCGACCACGACTCCTTC
GGCGAGCGGATCACGCACGAGCTCAAGCCGAACGGCGCGAACGTGGAGGTAACGGAAGAG
AACAAGCGCGAATACGTCAAGCTCTACGTCAACTGGAGATTCATGCGAGGGATCGAAGCC
CAGTTCCTTTCCCTTTCGAAGGGCTTCTACGAGTTGATCCCGCAACATCTTCTACGTCCG
TTCGACGAGCGCGAGTTGGAGCTGATCATCGGAGGACTTGGGAAGATCGACCTCGTGGAC
TGGAGGAAGCACACAAAGCTGAAGCATTGCTCTCAGGACTCCAACATCGTCAAGTGGTTC
TGGCAAGCCGTCGAGAGCTTCGACCAGGAGAAGAGAGCAAGGGTATTGCAGTTTGTCACT
GGTTCTAGGGTACCATTGCAAGGCTTCAAAGCGTTACAGGGCTCCACTGGAACCCAAGGT
CCCCGCCTTTTCACCATTCAATTCATTGATAGCAAAACTGATAGCTTACCTAAAGCCCAC
ACCTGTTTCAACCGGATTGATCTGCCGCCTTACGAAACCTACGAAAAGCTGCTCGATAAA
CTCACGTGCGCGGTGGAGAATACGTGCGGCTTCTACACCGAGTAA
| Gene3D |
C2_domain_sf (IPR035892) - T[1-68] 2.7E-7 |
| PIRSF |
E3_ub_ligase_SMURF1 (IPR024928) - T[2-66] 28.0 - T[65-654] 1.2E-189 |
| SUPERFAMILY |
WW_dom_sf (IPR036020) - T[144-186] 3.25E-10 - T[191-231] 5.15E-12 |
| ProSiteProfiles |
WW_dom (IPR001202) - T[150-183] 12.57 - T[196-229] 15.841 |
| SMART |
WW_dom (IPR001202) - T[151-183] 4.5E-8 - T[197-229] 2.2E-8 |
| Pfam |
WW_dom (IPR001202) - T[152-181] 2.0E-6 - T[198-227] 5.7E-8 |
| CDD |
WW_dom (IPR001202) - T[153-183] 1.3667E-7 - T[199-229] 4.13795E-8 |
| ProSitePatterns |
WW_dom (IPR001202) - T[202-227] . |
| CDD |
HECT_dom (IPR000569) - T[279-651] 7.86146E-160 |
| SUPERFAMILY |
Hect_E3_ubiquitin_ligase (IPR035983) - T[313-647] 1.83E-114 |
| SMART |
HECT_dom (IPR000569) - T[316-654] 1.1E-152 |
| ProSiteProfiles |
HECT_dom (IPR000569) - T[318-654] 104.93 |
| Pfam |
HECT_dom (IPR000569) - T[348-652] 4.2E-96 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| NED4L_HUMAN | 43.657 % | 461 | 5.54E-151 |
| SMUF1_HUMAN | 59.887 % | 824 | 0 |
| SMUF2_HUMAN | 60.619 % | 847 | 0 |